fix_genome_size

sanger-tol · Sep 21, 2023 · dc17a30 · dc17a30
1 parent 0a44839
commit dc17a30
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/conf/modules.config b/conf/modules.config
@@ -22,7 +22,7 @@ process {
 
     // Files to be uploaded to the TreeVal JBrowse2 instance
     // .genome, .gz.{tbi|csi}, .bigBed, .bigWig, .paf
-    withName: 'GENERATE_GENOME_FILE|TABIX_BGZIPTABIX|UCSC_BEDTOBIGBED|UCSC_BEDGRAPHTOBIGWIG|.*:.*:SYNTENY:MINIMAP2_ALIGN|.*:.*:GENERATE_GENOME:CUSTOM_GETCHROMSIZES' {
+    withName: 'GENERATE_GENOME_FILE|TABIX_BGZIPTABIX|UCSC_BEDTOBIGBED|UCSC_BEDGRAPHTOBIGWIG|.*:.*:SYNTENY:MINIMAP2_ALIGN|.*:.*:GENERATE_GENOME:GNU_SORT' {
         publishDir = [
             path: { "${params.outdir}/treeval_upload" },
             mode: params.publish_dir_mode,