Merge pull request #160 from tkchafin/merquryfk

removed merquryfk

CHANGELOG.md

@@ -3,13 +3,14 @@
 The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/)
 and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
 
-## [[2.1.0](https://github.com/sanger-tol/genomenote/releases/tag/2.1.0)] - Pembroke Welsh Corgi [2024-12-05]
+## [[2.1.0](https://github.com/sanger-tol/genomenote/releases/tag/2.1.0)] - Pembroke Welsh Corgi [2024-12-11]
 
 ### Enhancements & fixes
 
 - New annotation_statistics subworkfow which runs BUSCO in protein mode and generates some basic statistics on the the annotated gene set if provided with a GFF3 file of gene annotations using the `--annotation_set` option.
 - The genome_metadata subworkflow now queries Ensembl's GraphQL API to determine if Ensembl has released gene annotation for the assembly being processed.
 - Module updates and remove Anaconda channels
+- Removed merquryfk completeness metric
 
 ### Parameters
 
@@ -31,7 +32,7 @@ Note, since the pipeline is using Nextflow DSL2, each process will be run with i
 | `cooler`    | 0.8.11                                   | 0.9.2                                    |
 | `fastk`     | 427104ea91c78c3b8b8b49f1a7d6bbeaa869ba1c | 666652151335353eef2fcd58880bcef5bc2928e1 |
 | `gffread`   |                                          | 0.12.7                                   |
-| `merquryfk` | d00d98157618f4e8d1a9190026b19b471055b22e | 666652151335353eef2fcd58880bcef5bc2928e1 |
+| `merquryfk` | d00d98157618f4e8d1a9190026b19b471055b22e |                                          |
 | `multiqc`   | 1.14                                     | 1.25.1                                   |
 | `samtools`  | 1.17                                     | 1.21                                     |
 

modules.json

@@ -67,12 +67,6 @@
                         "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
                         "installed_by": ["modules"]
                     },
-                    "merquryfk/merquryfk": {
-                        "branch": "master",
-                        "git_sha": "666652151335353eef2fcd58880bcef5bc2928e1",
-                        "installed_by": ["modules"],
-                        "patch": "modules/nf-core/merquryfk/merquryfk/merquryfk-merquryfk.diff"
-                    },
                     "multiqc": {
                         "branch": "master",
                         "git_sha": "cf17ca47590cc578dfb47db1c2a44ef86f89976d",