Update website and data table for release

sanderlab · Jan 25, 2024 · e0214bc · e0214bc
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@@ -29,13 +29,13 @@ <h1>Single Cell Perturbation Datasets</h1>
             <h2>Read more and cite scPerturb</h2>
             <p>scPerturb: harmonized single-cell perturbation data
 Stefan Peidli, Tessa Durakis Green, Ciyue Shen, Torsten Gross, Joseph Min, Samuele Garda, Bo Yuan, Linus J. Schumacher, Jake P. Taylor-King, Debora S. Marks, Augustin Luna, Nils Blüthgen, Chris Sander
-bioRxiv 2022.08.20.504663; doi: <a href="https://doi.org/10.1101/2022.08.20.504663" target="_blank">10.1101/2022.08.20.504663</a></p>
+Nature Methods 2024; doi: <a href="https://doi.org/10.1038/s41592-023-02144-y" target="_blank">10.1038/s41592-023-02144-y</a></p>
             <h2>Data Explorer</h2>
-            <p>Explore dataset properties <a href="datavzrd/scPerturb_vzrd_v1/dataset_info/index_1.html" target="_blank">here</a> (e.g., links to publications, perturbation type, perturbation counts, etc.)</p>
+            <p>Explore dataset properties <a href="datavzrd/scPerturb_vzrd_v2/dataset_info/index_1.html" target="_blank">here</a> (e.g., links to publications, perturbation type, perturbation counts, etc.)</p>
             <h2>Data</h2>
             <ul>
-                <li>RNA-seq datasets: <a href="https://zenodo.org/record/7041849" target="_blank">zenodo.org/record/7041849</a></li>
-                <li>ATAC-seq: <a href="https://zenodo.org/record/7058382" target="_blank">zenodo.org/record/7058382</a></li>
+                <li>RNA-seq datasets: <a href="https://zenodo.org/doi/10.5281/zenodo.7041848" target="_blank">zenodo.org/doi/10.5281/zenodo.7041848</a></li>
+                <li>ATAC-seq: <a href="https://zenodo.org/doi/10.5281/zenodo.7058381" target="_blank">zenodo.org/doi/10.5281/zenodo.7058381</a></li>
                 <li>Dataset information: <a href="https://www.biorxiv.org/content/biorxiv/early/2022/08/22/2022.08.20.504663/DC1/embed/media-1.xlsx?download=true" target="_blank">bioRxiv Supplementary Table 1</a></li>
             </ul>
             <h2>Source Code</h2>