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Unicycler v0.4.1
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@rrwick rrwick released this 23 Aug 02:06
v0.4.1
c99f56f

Small changes and bug fixes:

  • Tweak logic to better include plasmids in the final assembly, even when the Illumina assembly graph is weird (thanks Matthew Croxen)
  • Makefile fix which caused some people to have compilation issues with zlib (thanks @tomasyeo, @andersgs and @swlong)
  • Made compilation less specific to avoid problems in heterogeneous environments (thanks @cerebis)
  • Fixed potential issues with read name parsing (thanks @cerebis)
  • Set a SPAdes thread limit to avoid memory issues (thanks @ConstantinV)
  • Better error messages with bad Illumina input reads (thanks Gabriele Margos)
  • Ability to manually set multiplicities in the Illumina graph, to override Unicycler's multiplicities when you think it's made a mistake
  • Efficiency improvements in assembly graph manipulations
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