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Porechop v0.2.2
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@rrwick rrwick released this 20 Oct 02:18
· 25 commits to master since this release
v0.2.2
10c4a6b

A few enhancements and fixes:

  • Can take directories as input, in which case it will recursively search for fastq files in that directory.
  • If the input directory is an Albacore output directory and Porechop is run with barcode demultiplexing, then it will only bin reads for which both Albacore and Porechop agree on the barcode.
  • New --untrimmed option to allow for Porechop demultiplexing without adapter trimming (thanks to @nickloman and @zibraproject for the PR).
  • If pigz is available, it will use that to compress the final reads instead of gzip (thanks to @asl for the idea).
  • Better output with progress indicators (thanks to @gringer for the idea).
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