Example update

romerogroup · Jun 9, 2024 · ba3aa76 · ba3aa76
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diff --git a/sphinx/source/examples/04-fermi3d/plot_fermi3d_plain_codeobj.pickle b/sphinx/source/examples/04-fermi3d/plot_fermi3d_plain_codeobj.pickle
diff --git a/sphinx/source/examples/04-fermi3d/plot_fermi3d_spin-polarized.rst b/sphinx/source/examples/04-fermi3d/plot_fermi3d_spin-polarized.rst
@@ -244,7 +244,7 @@ Parametric mode
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  24.356 seconds)
+   **Total running time of the script:** ( 0 minutes  25.406 seconds)
 
 
 .. _sphx_glr_download_examples_04-fermi3d_plot_fermi3d_spin-polarized.py:

diff --git a/sphinx/source/examples/04-fermi3d/plot_fermi3d_spin-polarized_codeobj.pickle b/sphinx/source/examples/04-fermi3d/plot_fermi3d_spin-polarized_codeobj.pickle
diff --git a/sphinx/source/examples/04-fermi3d/plot_fermi3d_spin_texture.rst b/sphinx/source/examples/04-fermi3d/plot_fermi3d_spin_texture.rst
@@ -157,7 +157,7 @@ Spin Texture mode
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 1 minutes  2.304 seconds)
+   **Total running time of the script:** ( 1 minutes  3.557 seconds)
 
 
 .. _sphx_glr_download_examples_04-fermi3d_plot_fermi3d_spin_texture.py:

diff --git a/sphinx/source/examples/04-fermi3d/plot_fermi3d_spin_texture_codeobj.pickle b/sphinx/source/examples/04-fermi3d/plot_fermi3d_spin_texture_codeobj.pickle
diff --git a/sphinx/source/examples/04-fermi3d/sg_execution_times.rst b/sphinx/source/examples/04-fermi3d/sg_execution_times.rst
@@ -6,22 +6,22 @@
 
 Computation times
 =================
-**05:12.762** total execution time for **examples_04-fermi3d** files:
+**05:16.084** total execution time for **examples_04-fermi3d** files:
 
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_cross_section.py` (``plot_fermi3d_cross_section.py``)   | 02:02.077 | 0.0 MB |
+| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_cross_section.py` (``plot_fermi3d_cross_section.py``)   | 01:59.250 | 0.0 MB |
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_spin_texture.py` (``plot_fermi3d_spin_texture.py``)     | 01:02.304 | 0.0 MB |
+| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_spin_texture.py` (``plot_fermi3d_spin_texture.py``)     | 01:03.557 | 0.0 MB |
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_isovalue_gif.py` (``plot_fermi3d_isovalue_gif.py``)     | 00:31.163 | 0.0 MB |
+| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_isovalue_gif.py` (``plot_fermi3d_isovalue_gif.py``)     | 00:32.177 | 0.0 MB |
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_isoslider.py` (``plot_fermi3d_isoslider.py``)           | 00:30.350 | 0.0 MB |
+| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_isoslider.py` (``plot_fermi3d_isoslider.py``)           | 00:31.293 | 0.0 MB |
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_spin-polarized.py` (``plot_fermi3d_spin-polarized.py``) | 00:24.356 | 0.0 MB |
+| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_spin-polarized.py` (``plot_fermi3d_spin-polarized.py``) | 00:25.406 | 0.0 MB |
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_plain.py` (``plot_fermi3d_plain.py``)                   | 00:15.851 | 0.0 MB |
+| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_configurations.py` (``plot_fermi3d_configurations.py``) | 00:15.826 | 0.0 MB |
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_configurations.py` (``plot_fermi3d_configurations.py``) | 00:15.118 | 0.0 MB |
+| :ref:`sphx_glr_examples_04-fermi3d_plot_fermi3d_plain.py` (``plot_fermi3d_plain.py``)                   | 00:15.462 | 0.0 MB |
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_04-fermi3d_plot_de_hass_van_alphen.py` (``plot_de_hass_van_alphen.py``)         | 00:11.543 | 0.0 MB |
+| :ref:`sphx_glr_examples_04-fermi3d_plot_de_hass_van_alphen.py` (``plot_de_hass_van_alphen.py``)         | 00:13.114 | 0.0 MB |
 +---------------------------------------------------------------------------------------------------------+-----------+--------+
diff --git a/sphinx/source/examples/05-other/images/sphx_glr_plot_ebs_004.png b/sphinx/source/examples/05-other/images/sphx_glr_plot_ebs_004.png
diff --git a/sphinx/source/examples/05-other/images/sphx_glr_plot_ebs_005.png b/sphinx/source/examples/05-other/images/sphx_glr_plot_ebs_005.png
diff --git a/sphinx/source/examples/05-other/plot_2dkmesh_generation.rst b/sphinx/source/examples/05-other/plot_2dkmesh_generation.rst
@@ -108,7 +108,7 @@ importing pyprocar and specifying local data_dir
            |___/
     A Python library for electronic structure pre/post-processing.
 
-    Version 6.1.9 created on Jun 10th, 2021
+    Version 6.1.10 created on Jun 10th, 2021
 
     Please cite:
      Uthpala Herath, Pedram Tavadze, Xu He, Eric Bousquet, Sobhit Singh, Francisco Muñoz and Aldo Romero.,
@@ -135,7 +135,7 @@ importing pyprocar and specifying local data_dir
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  0.521 seconds)
+   **Total running time of the script:** ( 0 minutes  0.445 seconds)
 
 
 .. _sphx_glr_download_examples_05-other_plot_2dkmesh_generation.py:

diff --git a/sphinx/source/examples/05-other/plot_2dkmesh_generation_codeobj.pickle b/sphinx/source/examples/05-other/plot_2dkmesh_generation_codeobj.pickle
diff --git a/sphinx/source/examples/05-other/plot_bandgap.rst b/sphinx/source/examples/05-other/plot_bandgap.rst
@@ -89,7 +89,7 @@ importing pyprocar and specifying local data_dir
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  0.129 seconds)
+   **Total running time of the script:** ( 0 minutes  0.134 seconds)
 
 
 .. _sphx_glr_download_examples_05-other_plot_bandgap.py:

diff --git a/sphinx/source/examples/05-other/plot_bandgap_codeobj.pickle b/sphinx/source/examples/05-other/plot_bandgap_codeobj.pickle
diff --git a/sphinx/source/examples/05-other/plot_ebs.rst b/sphinx/source/examples/05-other/plot_ebs.rst
@@ -341,7 +341,7 @@ Effective mass
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  4.394 seconds)
+   **Total running time of the script:** ( 0 minutes  4.476 seconds)
 
 
 .. _sphx_glr_download_examples_05-other_plot_ebs.py:

diff --git a/sphinx/source/examples/05-other/plot_ebs_codeobj.pickle b/sphinx/source/examples/05-other/plot_ebs_codeobj.pickle
diff --git a/sphinx/source/examples/05-other/plot_kpath_generation.rst b/sphinx/source/examples/05-other/plot_kpath_generation.rst
@@ -151,7 +151,7 @@ importing pyprocar and specifying local data_dir
            |___/
     A Python library for electronic structure pre/post-processing.
 
-    Version 6.1.9 created on Jun 10th, 2021
+    Version 6.1.10 created on Jun 10th, 2021
 
     Please cite:
      Uthpala Herath, Pedram Tavadze, Xu He, Eric Bousquet, Sobhit Singh, Francisco Muñoz and Aldo Romero.,
@@ -178,7 +178,7 @@ importing pyprocar and specifying local data_dir
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  0.573 seconds)
+   **Total running time of the script:** ( 0 minutes  0.560 seconds)
 
 
 .. _sphx_glr_download_examples_05-other_plot_kpath_generation.py:

diff --git a/sphinx/source/examples/05-other/plot_kpath_generation_codeobj.pickle b/sphinx/source/examples/05-other/plot_kpath_generation_codeobj.pickle
diff --git a/sphinx/source/examples/05-other/sg_execution_times.rst b/sphinx/source/examples/05-other/sg_execution_times.rst
@@ -6,14 +6,14 @@
 
 Computation times
 =================
-**00:05.617** total execution time for **examples_05-other** files:
+**00:05.615** total execution time for **examples_05-other** files:
 
 +-----------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_05-other_plot_ebs.py` (``plot_ebs.py``)                               | 00:04.394 | 0.0 MB |
+| :ref:`sphx_glr_examples_05-other_plot_ebs.py` (``plot_ebs.py``)                               | 00:04.476 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_05-other_plot_kpath_generation.py` (``plot_kpath_generation.py``)     | 00:00.573 | 0.0 MB |
+| :ref:`sphx_glr_examples_05-other_plot_kpath_generation.py` (``plot_kpath_generation.py``)     | 00:00.560 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_05-other_plot_2dkmesh_generation.py` (``plot_2dkmesh_generation.py``) | 00:00.521 | 0.0 MB |
+| :ref:`sphx_glr_examples_05-other_plot_2dkmesh_generation.py` (``plot_2dkmesh_generation.py``) | 00:00.445 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_05-other_plot_bandgap.py` (``plot_bandgap.py``)                       | 00:00.129 | 0.0 MB |
+| :ref:`sphx_glr_examples_05-other_plot_bandgap.py` (``plot_bandgap.py``)                       | 00:00.134 | 0.0 MB |
 +-----------------------------------------------------------------------------------------------+-----------+--------+
diff --git a/sphinx/source/examples/06-PyPoscar/plot_clusters_pyposcar.rst b/sphinx/source/examples/06-PyPoscar/plot_clusters_pyposcar.rst
@@ -176,7 +176,7 @@ Visualizing the Clusters
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  6.081 seconds)
+   **Total running time of the script:** ( 0 minutes  5.981 seconds)
 
 
 .. _sphx_glr_download_examples_06-PyPoscar_plot_clusters_pyposcar.py:

diff --git a/sphinx/source/examples/06-PyPoscar/plot_clusters_pyposcar_codeobj.pickle b/sphinx/source/examples/06-PyPoscar/plot_clusters_pyposcar_codeobj.pickle
diff --git a/sphinx/source/examples/06-PyPoscar/plot_finding_defects_pyposcar.rst b/sphinx/source/examples/06-PyPoscar/plot_finding_defects_pyposcar.rst
@@ -177,7 +177,7 @@ Finding defects
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  7.393 seconds)
+   **Total running time of the script:** ( 0 minutes  6.796 seconds)
 
 
 .. _sphx_glr_download_examples_06-PyPoscar_plot_finding_defects_pyposcar.py:

diff --git a/sphinx/source/examples/06-PyPoscar/plot_finding_defects_pyposcar_codeobj.pickle b/sphinx/source/examples/06-PyPoscar/plot_finding_defects_pyposcar_codeobj.pickle
diff --git a/sphinx/source/examples/06-PyPoscar/plot_rdf_cutoff_pyposcar.rst b/sphinx/source/examples/06-PyPoscar/plot_rdf_cutoff_pyposcar.rst
@@ -237,7 +237,7 @@ Visualizing the Results
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  0.630 seconds)
+   **Total running time of the script:** ( 0 minutes  0.668 seconds)
 
 
 .. _sphx_glr_download_examples_06-PyPoscar_plot_rdf_cutoff_pyposcar.py:

diff --git a/sphinx/source/examples/06-PyPoscar/plot_rdf_cutoff_pyposcar_codeobj.pickle b/sphinx/source/examples/06-PyPoscar/plot_rdf_cutoff_pyposcar_codeobj.pickle
diff --git a/sphinx/source/examples/06-PyPoscar/plot_subsitution_pyposcar.rst b/sphinx/source/examples/06-PyPoscar/plot_subsitution_pyposcar.rst
@@ -262,7 +262,7 @@ Creating GIFs for Visualization
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  6.288 seconds)
+   **Total running time of the script:** ( 0 minutes  5.928 seconds)
 
 
 .. _sphx_glr_download_examples_06-PyPoscar_plot_subsitution_pyposcar.py:

diff --git a/sphinx/source/examples/06-PyPoscar/plot_subsitution_pyposcar_codeobj.pickle b/sphinx/source/examples/06-PyPoscar/plot_subsitution_pyposcar_codeobj.pickle
diff --git a/sphinx/source/examples/06-PyPoscar/plot_utils_pyposcar.rst b/sphinx/source/examples/06-PyPoscar/plot_utils_pyposcar.rst
@@ -343,7 +343,7 @@ Introducing Defects
 
 .. rst-class:: sphx-glr-timing
 
-   **Total running time of the script:** ( 0 minutes  17.455 seconds)
+   **Total running time of the script:** ( 0 minutes  16.982 seconds)
 
 
 .. _sphx_glr_download_examples_06-PyPoscar_plot_utils_pyposcar.py:

diff --git a/sphinx/source/examples/06-PyPoscar/plot_utils_pyposcar_codeobj.pickle b/sphinx/source/examples/06-PyPoscar/plot_utils_pyposcar_codeobj.pickle
diff --git a/sphinx/source/examples/06-PyPoscar/sg_execution_times.rst b/sphinx/source/examples/06-PyPoscar/sg_execution_times.rst
@@ -6,16 +6,16 @@
 
 Computation times
 =================
-**00:37.848** total execution time for **examples_06-PyPoscar** files:
+**00:36.356** total execution time for **examples_06-PyPoscar** files:
 
 +--------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_06-PyPoscar_plot_utils_pyposcar.py` (``plot_utils_pyposcar.py``)                     | 00:17.455 | 0.0 MB |
+| :ref:`sphx_glr_examples_06-PyPoscar_plot_utils_pyposcar.py` (``plot_utils_pyposcar.py``)                     | 00:16.982 | 0.0 MB |
 +--------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_06-PyPoscar_plot_finding_defects_pyposcar.py` (``plot_finding_defects_pyposcar.py``) | 00:07.393 | 0.0 MB |
+| :ref:`sphx_glr_examples_06-PyPoscar_plot_finding_defects_pyposcar.py` (``plot_finding_defects_pyposcar.py``) | 00:06.796 | 0.0 MB |
 +--------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_06-PyPoscar_plot_subsitution_pyposcar.py` (``plot_subsitution_pyposcar.py``)         | 00:06.288 | 0.0 MB |
+| :ref:`sphx_glr_examples_06-PyPoscar_plot_clusters_pyposcar.py` (``plot_clusters_pyposcar.py``)               | 00:05.981 | 0.0 MB |
 +--------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_06-PyPoscar_plot_clusters_pyposcar.py` (``plot_clusters_pyposcar.py``)               | 00:06.081 | 0.0 MB |
+| :ref:`sphx_glr_examples_06-PyPoscar_plot_subsitution_pyposcar.py` (``plot_subsitution_pyposcar.py``)         | 00:05.928 | 0.0 MB |
 +--------------------------------------------------------------------------------------------------------------+-----------+--------+
-| :ref:`sphx_glr_examples_06-PyPoscar_plot_rdf_cutoff_pyposcar.py` (``plot_rdf_cutoff_pyposcar.py``)           | 00:00.630 | 0.0 MB |
+| :ref:`sphx_glr_examples_06-PyPoscar_plot_rdf_cutoff_pyposcar.py` (``plot_rdf_cutoff_pyposcar.py``)           | 00:00.668 | 0.0 MB |
 +--------------------------------------------------------------------------------------------------------------+-----------+--------+
diff --git a/sphinx/source/examples/examples_jupyter.zip b/sphinx/source/examples/examples_jupyter.zip
diff --git a/sphinx/source/examples/examples_python.zip b/sphinx/source/examples/examples_python.zip