Updated pypi to v6.1.8

romerogroup · Mar 5, 2024 · 433fb28 · 433fb28
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diff --git a/README.md b/README.md
@@ -6,7 +6,7 @@
 
 Notice
 ===========
-- **New Release** We recently updated to a new version 'v6.1.7'. This update encompasses a significant overhaul of the codebase, updated documentation, and .
+- **New Release** We recently updated to a new version 'v6.1.8'. This update encompasses a significant overhaul of the codebase, updated documentation, and .
 - **Support for Previous Versions**: For users who prefer to continue with an older version, we have conveniently archived the previous releases on GitHub, and provided a link to the corresponding documentation.
 
 
@@ -135,6 +135,7 @@ will bring a help menu.
 
 Changelog
 --------------
+v6.1.8 Mar 5th, 2024 -- Bug fixes to stack_orbital in dosplot <br />
 v6.1.7 Jan 15th, 2024 -- Bug fixes and doc updates <br />
 v6.1.6 Oct 10th, 2023 -- Bandsplot, dosplot, bandsdosplot chnages, bug fixes, doc updates <br />
 v6.1.5 Oct 10th, 2023 -- Feature additions, example gallery additions, and doc updates <br />

diff --git a/docs/.buildinfo b/docs/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: aea0b65a1ad033aad36b6b9855be25ff
+config: 61e2986449091a7be4f25a8af15fb3b5
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/_modules/index.html b/docs/_modules/index.html
@@ -7,7 +7,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>Overview: module code &#8212; PyProcar 6.1.7 documentation</title>
+    <title>Overview: module code &#8212; PyProcar 6.1.8 documentation</title>
 
 
 
@@ -39,7 +39,7 @@
   <link rel="preload" as="script" href="../_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
 <link rel="preload" as="script" href="../_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />
 
-    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js?v=c6c15522"></script>
+    <script data-url_root="../" id="documentation_options" src="../_static/documentation_options.js?v=64b6a465"></script>
     <script src="../_static/doctools.js?v=888ff710"></script>
     <script src="../_static/sphinx_highlight.js?v=4825356b"></script>
     <script src="../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -109,7 +109,7 @@
 
 
 
-    <p class="title logo__title">PyProcar 6.1.7 documentation</p>
+    <p class="title logo__title">PyProcar 6.1.8 documentation</p>
 
 </a></div>
 

diff --git a/docs/_modules/pyprocar/plotter/dos_plot.html b/docs/_modules/pyprocar/plotter/dos_plot.html
@@ -7,7 +7,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>pyprocar.plotter.dos_plot &#8212; PyProcar 6.1.7 documentation</title>
+    <title>pyprocar.plotter.dos_plot &#8212; PyProcar 6.1.8 documentation</title>
 
 
 
@@ -39,7 +39,7 @@
   <link rel="preload" as="script" href="../../../_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
 <link rel="preload" as="script" href="../../../_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />
 
-    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js?v=c6c15522"></script>
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js?v=64b6a465"></script>
     <script src="../../../_static/doctools.js?v=888ff710"></script>
     <script src="../../../_static/sphinx_highlight.js?v=4825356b"></script>
     <script src="../../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -109,7 +109,7 @@
 
 
 
-    <p class="title logo__title">PyProcar 6.1.7 documentation</p>
+    <p class="title logo__title">PyProcar 6.1.8 documentation</p>
 
 </a></div>
 
@@ -1075,9 +1075,12 @@ <h1>Source code for pyprocar.plotter.dos_plot</h1><div class="highlight"><pre>
         <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">dos</span><span class="o">.</span><span class="n">is_non_collinear</span> <span class="ow">and</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dos</span><span class="o">.</span><span class="n">projected</span><span class="p">[</span><span class="mi">0</span><span class="p">][</span><span class="mi">0</span><span class="p">])</span> <span class="o">==</span> <span class="mi">2</span> <span class="o">+</span> <span class="mi">2</span> <span class="o">+</span> <span class="mi">4</span> <span class="o">+</span> <span class="mi">4</span> <span class="o">+</span> <span class="mi">6</span><span class="p">:</span>
             <span class="n">orb_names</span> <span class="o">=</span> <span class="p">[</span><span class="s2">&quot;s-j=0.5&quot;</span><span class="p">,</span> <span class="s2">&quot;p-j=0.5&quot;</span><span class="p">,</span> <span class="s2">&quot;p-j=1.5&quot;</span><span class="p">,</span> <span class="s2">&quot;d-j=1.5&quot;</span><span class="p">,</span> <span class="s2">&quot;d-j=2.5&quot;</span><span class="p">]</span>
             <span class="n">orb_l</span> <span class="o">=</span> <span class="p">[[</span><span class="mi">0</span><span class="p">,</span><span class="mi">1</span><span class="p">],</span> <span class="p">[</span><span class="mi">2</span><span class="p">,</span><span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">,</span> <span class="mi">7</span><span class="p">],</span> <span class="p">[</span><span class="mi">8</span><span class="p">,</span><span class="mi">9</span><span class="p">,</span><span class="mi">10</span><span class="p">,</span><span class="mi">11</span><span class="p">],</span> <span class="p">[</span><span class="mi">12</span><span class="p">,</span><span class="mi">13</span><span class="p">,</span><span class="mi">14</span><span class="p">,</span><span class="mi">15</span><span class="p">,</span><span class="mi">16</span><span class="p">,</span><span class="mi">17</span><span class="p">]]</span>
-        <span class="k">else</span><span class="p">:</span>
+        <span class="k">elif</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dos</span><span class="o">.</span><span class="n">projected</span><span class="p">[</span><span class="mi">0</span><span class="p">][</span><span class="mi">0</span><span class="p">])</span> <span class="o">==</span> <span class="mi">1</span> <span class="o">+</span> <span class="mi">3</span> <span class="o">+</span> <span class="mi">5</span><span class="p">:</span>
             <span class="n">orb_names</span> <span class="o">=</span> <span class="p">[</span><span class="s2">&quot;s&quot;</span><span class="p">,</span> <span class="s2">&quot;p&quot;</span><span class="p">,</span> <span class="s2">&quot;d&quot;</span><span class="p">]</span>
             <span class="n">orb_l</span> <span class="o">=</span> <span class="p">[[</span><span class="mi">0</span><span class="p">],</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">,</span> <span class="mi">7</span><span class="p">,</span> <span class="mi">8</span><span class="p">]]</span>
+        <span class="k">elif</span> <span class="nb">len</span><span class="p">(</span><span class="bp">self</span><span class="o">.</span><span class="n">dos</span><span class="o">.</span><span class="n">projected</span><span class="p">[</span><span class="mi">0</span><span class="p">][</span><span class="mi">0</span><span class="p">])</span> <span class="o">==</span> <span class="mi">1</span> <span class="o">+</span> <span class="mi">3</span> <span class="o">+</span> <span class="mi">5</span> <span class="o">+</span> <span class="mi">7</span><span class="p">:</span>
+            <span class="n">orb_names</span> <span class="o">=</span> <span class="p">[</span><span class="s2">&quot;s&quot;</span><span class="p">,</span> <span class="s2">&quot;p&quot;</span><span class="p">,</span> <span class="s2">&quot;d&quot;</span><span class="p">,</span> <span class="s2">&quot;f&quot;</span><span class="p">]</span>
+            <span class="n">orb_l</span> <span class="o">=</span> <span class="p">[[</span><span class="mi">0</span><span class="p">],</span> <span class="p">[</span><span class="mi">1</span><span class="p">,</span> <span class="mi">2</span><span class="p">,</span> <span class="mi">3</span><span class="p">],</span> <span class="p">[</span><span class="mi">4</span><span class="p">,</span> <span class="mi">5</span><span class="p">,</span> <span class="mi">6</span><span class="p">,</span> <span class="mi">7</span><span class="p">,</span> <span class="mi">8</span><span class="p">],</span> <span class="p">[</span><span class="mi">9</span><span class="p">,</span> <span class="mi">10</span><span class="p">,</span> <span class="mi">11</span><span class="p">,</span> <span class="mi">12</span><span class="p">,</span> <span class="mi">13</span><span class="p">,</span> <span class="mi">14</span><span class="p">,</span> <span class="mi">15</span><span class="p">]]</span>
 
 
         <span class="n">dos_total</span> <span class="o">=</span> <span class="bp">self</span><span class="o">.</span><span class="n">dos</span><span class="o">.</span><span class="n">total</span>
@@ -1125,6 +1128,7 @@ <h1>Source code for pyprocar.plotter.dos_plot</h1><div class="highlight"><pre>
                     <span class="bp">self</span><span class="o">.</span><span class="n">labels</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">atom_names</span> <span class="o">+</span> <span class="n">orb_names</span><span class="p">[</span><span class="n">iorb</span><span class="p">]</span> <span class="o">+</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;spin_labels&#39;</span><span class="p">][</span><span class="s1">&#39;value&#39;</span><span class="p">][</span><span class="n">ispin</span><span class="p">])</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">handles</span><span class="o">.</span><span class="n">append</span><span class="p">(</span><span class="n">handle</span><span class="p">)</span>
                     <span class="n">bottom</span> <span class="o">+=</span> <span class="n">y</span>
+
             <span class="k">if</span> <span class="bp">self</span><span class="o">.</span><span class="n">config</span><span class="p">[</span><span class="s1">&#39;plot_total&#39;</span><span class="p">][</span><span class="s1">&#39;value&#39;</span><span class="p">]</span> <span class="o">==</span> <span class="kc">True</span><span class="p">:</span>
                 <span class="k">if</span> <span class="n">ispin</span> <span class="o">==</span> <span class="mi">0</span><span class="p">:</span>
                     <span class="bp">self</span><span class="o">.</span><span class="n">ax</span><span class="o">.</span><span class="n">plot</span><span class="p">(</span>

diff --git a/docs/_modules/pyprocar/plotter/ebs_plot.html b/docs/_modules/pyprocar/plotter/ebs_plot.html
@@ -7,7 +7,7 @@
   <head>
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" />
-    <title>pyprocar.plotter.ebs_plot &#8212; PyProcar 6.1.7 documentation</title>
+    <title>pyprocar.plotter.ebs_plot &#8212; PyProcar 6.1.8 documentation</title>
 
 
 
@@ -39,7 +39,7 @@
   <link rel="preload" as="script" href="../../../_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
 <link rel="preload" as="script" href="../../../_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />
 
-    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js?v=c6c15522"></script>
+    <script data-url_root="../../../" id="documentation_options" src="../../../_static/documentation_options.js?v=64b6a465"></script>
     <script src="../../../_static/doctools.js?v=888ff710"></script>
     <script src="../../../_static/sphinx_highlight.js?v=4825356b"></script>
     <script src="../../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -109,7 +109,7 @@
 
 
 
-    <p class="title logo__title">PyProcar 6.1.7 documentation</p>
+    <p class="title logo__title">PyProcar 6.1.8 documentation</p>
 
 </a></div>
 

diff --git a/docs/_static/documentation_options.js b/docs/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '6.1.7',
+    VERSION: '6.1.8',
     LANGUAGE: 'en',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

diff --git a/docs/api/cfg/band_structure.html b/docs/api/cfg/band_structure.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>band structure plotting Options &#8212; PyProcar 6.1.7 documentation</title>
+    <title>band structure plotting Options &#8212; PyProcar 6.1.8 documentation</title>
 
 
 
@@ -40,7 +40,7 @@
   <link rel="preload" as="script" href="../../_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
 <link rel="preload" as="script" href="../../_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />
 
-    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=c6c15522"></script>
+    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=64b6a465"></script>
     <script src="../../_static/doctools.js?v=888ff710"></script>
     <script src="../../_static/sphinx_highlight.js?v=4825356b"></script>
     <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -112,7 +112,7 @@
 
 
 
-    <p class="title logo__title">PyProcar 6.1.7 documentation</p>
+    <p class="title logo__title">PyProcar 6.1.8 documentation</p>
 
 </a></div>
 

diff --git a/docs/api/cfg/band_structure_2d.html b/docs/api/cfg/band_structure_2d.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>band structure 2d plotting Options &#8212; PyProcar 6.1.7 documentation</title>
+    <title>band structure 2d plotting Options &#8212; PyProcar 6.1.8 documentation</title>
 
 
 
@@ -40,7 +40,7 @@
   <link rel="preload" as="script" href="../../_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
 <link rel="preload" as="script" href="../../_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />
 
-    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=c6c15522"></script>
+    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=64b6a465"></script>
     <script src="../../_static/doctools.js?v=888ff710"></script>
     <script src="../../_static/sphinx_highlight.js?v=4825356b"></script>
     <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -112,7 +112,7 @@
 
 
 
-    <p class="title logo__title">PyProcar 6.1.7 documentation</p>
+    <p class="title logo__title">PyProcar 6.1.8 documentation</p>
 
 </a></div>
 

diff --git a/docs/api/cfg/dos.html b/docs/api/cfg/dos.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>dos plotting Options &#8212; PyProcar 6.1.7 documentation</title>
+    <title>dos plotting Options &#8212; PyProcar 6.1.8 documentation</title>
 
 
 
@@ -40,7 +40,7 @@
   <link rel="preload" as="script" href="../../_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
 <link rel="preload" as="script" href="../../_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />
 
-    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=c6c15522"></script>
+    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=64b6a465"></script>
     <script src="../../_static/doctools.js?v=888ff710"></script>
     <script src="../../_static/sphinx_highlight.js?v=4825356b"></script>
     <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -112,7 +112,7 @@
 
 
 
-    <p class="title logo__title">PyProcar 6.1.7 documentation</p>
+    <p class="title logo__title">PyProcar 6.1.8 documentation</p>
 
 </a></div>
 

diff --git a/docs/api/cfg/fermi_surface_2d.html b/docs/api/cfg/fermi_surface_2d.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>fermi surface 2d plotting Options &#8212; PyProcar 6.1.7 documentation</title>
+    <title>fermi surface 2d plotting Options &#8212; PyProcar 6.1.8 documentation</title>
 
 
 
@@ -40,7 +40,7 @@
   <link rel="preload" as="script" href="../../_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
 <link rel="preload" as="script" href="../../_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />
 
-    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=c6c15522"></script>
+    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=64b6a465"></script>
     <script src="../../_static/doctools.js?v=888ff710"></script>
     <script src="../../_static/sphinx_highlight.js?v=4825356b"></script>
     <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -112,7 +112,7 @@
 
 
 
-    <p class="title logo__title">PyProcar 6.1.7 documentation</p>
+    <p class="title logo__title">PyProcar 6.1.8 documentation</p>
 
 </a></div>
 

diff --git a/docs/api/cfg/fermi_surface_3d.html b/docs/api/cfg/fermi_surface_3d.html
@@ -8,7 +8,7 @@
     <meta charset="utf-8" />
     <meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="viewport" content="width=device-width, initial-scale=1" />
 
-    <title>fermi surface 3d plotting Options &#8212; PyProcar 6.1.7 documentation</title>
+    <title>fermi surface 3d plotting Options &#8212; PyProcar 6.1.8 documentation</title>
 
 
 
@@ -40,7 +40,7 @@
   <link rel="preload" as="script" href="../../_static/scripts/bootstrap.js?digest=e353d410970836974a52" />
 <link rel="preload" as="script" href="../../_static/scripts/pydata-sphinx-theme.js?digest=e353d410970836974a52" />
 
-    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=c6c15522"></script>
+    <script data-url_root="../../" id="documentation_options" src="../../_static/documentation_options.js?v=64b6a465"></script>
     <script src="../../_static/doctools.js?v=888ff710"></script>
     <script src="../../_static/sphinx_highlight.js?v=4825356b"></script>
     <script src="../../_static/clipboard.min.js?v=a7894cd8"></script>
@@ -112,7 +112,7 @@
 
 
 
-    <p class="title logo__title">PyProcar 6.1.7 documentation</p>
+    <p class="title logo__title">PyProcar 6.1.8 documentation</p>
 
 </a></div>