This is a FASTA (https://en.wikipedia.org/wiki/FASTA) database of HIV1 sourced from: http://www.bioafrica.net/proteomics/HIVproteome.html
It contains peptide sequences for HIV1. The sequences map to common protein names as follows:
- HIV1-HXB2-CA.fasta (P24): Core Antigen Capsid p24 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-ENV.fasta (ENV): sp|P04578|ENV_HV1H2 Envelope polyprotein GP160 precursor [Contains: Exterior membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-GAG.fasta (GAG): sp|P04591|GAG_HV1H2 GAG polyprotein [Contains: Core proteins P17, P24, P2, P7, P1, P6] - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-GP120.fasta (GP120): Exterior membrane Envelope glycoprotein GP120 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-GP41.fasta (GP41): Transmembrane Envelope glycoprotein GP41 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-IN.fasta (P31,INT): Integrase p31 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-MA.fasta (P17): Core Matrix p17 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-NC.fasta (P7): Core Nucleocapsid p7 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-NEF.fasta (NEF): sp|P04601|NEF_HV1H2 Negative factor (F-protein) (27 kDa protein) (3'ORF) - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-POL.fasta (POL): sp|P04585|POL_HV1H2 POL polyprotein [Contains: Protease (Retropepsin) (EC 3.4.23.16); Reverse transcriptase (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4)] - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-PR.fasta (P15,PRO): Protease (Retropepsin) p15 (EC 3.4.23.16) - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-REV.fasta (REV): sp|P04618|REV_HV1H2 REV protein (Anti-repression transactivator protein) (ART/TRS) - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-RNH.fasta (P15): Ribonuclease H p15 (EC 3.1.26.4) - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-RT.fasta (RT,P51): Reverse Transcriptase p51 (EC 2.7.7.49) - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-TAT.fasta (TAT): sp|P04608|TAT_HV1H2 TAT protein (Transactivating regulatory protein) - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-VIF.fasta (P23): sp|P03401|VIF_HV1B1 Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1)
- HIV1-HXB2-p1.fasta (P1): Gag p1 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-p2.fasta (P2): Gag p2 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-p6.fasta (P6): Gag p6 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).
- HIV1-HXB2-p66.fasta (P66): RT_RNase H p66 - Human immunodeficiency virus type 1 (HXB2 isolate) (HIV-1).