Analyze Amplicon

This script analyze multi-plexed amplicon sequencing data.

Getting Started

Prerequisites

• FLASh: https://ccb.jhu.edu/software/FLASH/
• TRIMMOMATIC: http://www.usadellab.org/cms/?page=trimmomatic

Installing

Install all pre-requisites. Download the PERL script and modify the PATH to pre-requisites in the script.

Authors

• Qi Sun - Initial work

License

This project is licensed under the MIT License - see the LICENSE.md file for details

Acknowledgments