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Prepare for 0.11.0 release #697

Merged
merged 151 commits into from
Nov 9, 2024
Merged

Prepare for 0.11.0 release #697

merged 151 commits into from
Nov 9, 2024

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hakonanes
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@hakonanes hakonanes commented Nov 9, 2024 •
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Description of the change

This PR prepares the main branch for the 0.11.0 release. This release supports HyperSpy >= 2.2 (finally).

Progress of the PR

For reviewers

  • The PR title is short, concise, and will make sense 1 year later.
  • New functions are imported in corresponding __init__.py.
  • New features, API changes, and deprecations are mentioned in the unreleased
    section in CHANGELOG.rst.
  • New contributors are added to kikuchipy/__init__.py and .zenodo.json.

@hakonanes
Yet another Unreleased changelog section awaiting things
e48e326 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Replace use of deprecated from_neo_euler() -> from_rodrigues()
e085f1c 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Bump version to 0.11.dev0
309e7dc 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Comment out failing test, to be fixed later
6629063 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Restrict scipy to < 1.14 until HyperSpy 2.0 is supported
67b6bcb 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Allow flaky HI test to rerun up to five times
df20e1e 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Merge pull request pyxem#683 from hakonanes/main-into-develop-after-0…
e5fad49 
….10.0

Main into develop after 0.10.0
@hakonanes
Replace setup.py and setup.cfg with pyproject.toml, Hatch as build tool
bfe4ebf 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove MANIFEST.in file
68880fc 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Simplify README, also removing the all-contributors table
45ab857 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Add contrasting border to "kikuchipy" in banner images
60d9750 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove unnecessary CONTRIBUTING script pointing to docs
7c82326 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove kikuchipy/release.py and references to it or the all-contribut…
f6cdf15 
…ors table

Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Update action versions in GitHub actions
f8dccae 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove more references to kikuchipy.release file
d5d3285 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remember to install coverage packages on CI
8444b85 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Start testing on Python 3.12
42b9e26 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove use of release script in docs
7197e60 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Install build package before installing dependencies
2c20c34 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Ensure HyperSpy 1.7.6 with Python >= 3.12
b6a7c74 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Move hyperspy_extension.yaml file until HyperSpy 2.0 is supported
52f3e31 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Temporarily duplicate HS extension file
fb9a005 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Uncomment nlopt in config
c49fbac 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Merge pull request pyxem#684 from hakonanes/hatch-n-pyproject
361f546
@hakonanes
Move source code to src/kikuchipy and tests to tests/
fc55fa8 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Put paths to data files in fixtures
c06fbd5 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove all pragma: no cover in tests (unnecessary), use fixtures further
9f3226d 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Rename doc build directory to _build
eeb25f1 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Re-run tutorial notebooks after changing to src layout
b5072f5 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Update test warnings to silence
b0045f1 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Exclude NaN entries when plotting Kikuchi pattern simulation features
dd8b2b9 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Pass star polygon collection to HyperSpy for PC markers
f2cd03f 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Test improved handling of PC markers
2884727 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove unnecessary import for type checking
8b4f97b 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Update notebooks with stored output following update to HyperSpy v2
e9a189d 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Merge pull request pyxem#695 from hakonanes/hs2-markers-compat
b7f4dc8 
Update use of markers to HyperSpy v2
@hakonanes
Merge pull request pyxem#696 from pyxem/hyperspy2-support
82c3d99 
Bring HyperSpy 2 compatibility work into develop branch
@hakonanes
Set minimum HyperSpy version to 2.2
b838373 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Prepare changelog for 0.11.0 release
d6972dd 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Update version to 0.11.0
04e6981 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove Hatch option to install dependencies from direct URL
43785fd 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes hakonanes added the maintenance This relates to package maintenance label Nov 9, 2024
@hakonanes hakonanes added this to the v0.11.0 milestone Nov 9, 2024
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@hakonanes hakonanes marked this pull request as draft November 9, 2024 10:01
@hakonanes
Fix subclassing of NumPy ndarray for Window class
c63bad4 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Remove now unnecessary warning in NORDIF reader
cbab0d9 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Silence test suite warning from scikit-image for CLAHE
03c21ed 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Extract values from numpy.fromfile() before casting to numbers
6ea183f 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Restructure internal utilities
4635faa 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Improve handling of valid projections and hemispheres in IO
551cac2 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Improve calculation of kinematical EBSD master pattern
4803b5a 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Restrict progressbar to 80 columns
1a0418f 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Iterate over reflectors, not unit sphere coordinates
cececc8 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Fix links to diffsims in kinematical EBSD simulation tutorial
ad07063 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Force EBSD detector shape to be Python ints in repr
52346c1 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes
Fix some internal API reference links
c6602b6 
Signed-off-by: Håkon Wiik Ånes <[email protected]>
@hakonanes hakonanes marked this pull request as ready for review November 9, 2024 17:27
@hakonanes hakonanes merged commit 01c116f into pyxem:main Nov 9, 2024
10 checks passed
@hakonanes hakonanes deleted the prepare-0.11.0-release branch November 9, 2024 18:20
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