Bring HyperSpy 2 compatibility work into develop branch #375
Workflow file for this run
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| name: Tests | |
| on: | |
| push: | |
| branches: | |
| - '*' | |
| pull_request: | |
| branches: | |
| - '*' | |
| workflow_dispatch: | |
| jobs: | |
| code: | |
| name: code style | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: psf/black@stable | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.12' | |
| - uses: isort/isort-action@master | |
| with: | |
| configuration: --profile black --filter-files --force-sort-within-sections --check-only --diff | |
| - name: Install Black with Jupyter extension | |
| run: | | |
| pip install black[jupyter] | |
| - name: Check code style of Jupyter notebooks | |
| run: | | |
| black --diff --line-length 77 doc/tutorials/*.ipynb | |
| tests: | |
| name: ${{ matrix.os }}-py${{ matrix.python-version }}${{ matrix.LABEL }} | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 15 | |
| env: | |
| MPLBACKEND: agg | |
| PYTEST_ARGS: --reruns 2 -n 2 --cov=kikuchipy | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, windows-latest, macos-latest] | |
| python-version: ['3.11', '3.12'] | |
| include: | |
| - os: ubuntu-latest | |
| python-version: '3.10' | |
| DEPENDENCIES: dask==2021.8.1 diffsims==0.5.2 hyperspy>=2 matplotlib==3.5 numba==0.57 numpy==1.23.0 orix==0.12.1 pooch==1.3.0 pyebsdindex==0.2.0 scikit-image==0.21.0 | |
| LABEL: -oldest | |
| - os: ubuntu-latest | |
| python-version: '3.12' | |
| LABEL: -minimum_requirement | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - name: Install dependencies and package | |
| shell: bash | |
| run: | | |
| pip install wheel | |
| pip install -U -e ".[tests,coverage]" | |
| - name: Install oldest supported version | |
| if: contains(matrix.LABEL, 'oldest') | |
| run: | | |
| pip install ${{ matrix.DEPENDENCIES }} | |
| - name: Install optional dependencies on Linux and Windows | |
| if: ${{ contains(matrix.LABEL, 'minimum_requirement') == false && matrix.os != 'macos-latest' }} | |
| shell: bash | |
| run: | | |
| pip install -e ".[all]" | |
| pip install pyopencl | |
| - name: Install optional dependencies on macOS (without nlopt) | |
| if: ${{ contains(matrix.LABEL, 'minimum_requirement') == false && matrix.os == 'macos-latest' }} | |
| shell: bash | |
| run: | | |
| pip install -e . | |
| pip install "pyebsdindex[gpu]" pyvista | |
| - name: Display Python, pip and package versions | |
| run: | | |
| python -V | |
| pip -V | |
| pip list | |
| - name: Set up headless display necessary for PyVista on Linux | |
| if: ${{ matrix.os == 'ubuntu-latest' }} | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install xvfb | |
| /sbin/ldconfig -p | grep stdc++ # Temporarily check location | |
| - name: Set up headless display necessary for PyVista on Windows | |
| if: ${{ matrix.os == 'windows-latest' }} | |
| uses: pyvista/setup-headless-display-action@v1 | |
| - name: Run docstring tests | |
| if: ${{ matrix.os == 'ubuntu-latest' }} | |
| continue-on-error: true | |
| run: | | |
| xvfb-run pytest src --doctest-modules --doctest-continue-on-failure | |
| - name: Run tests in a virtual X server environment on Ubuntu | |
| if: ${{ matrix.os == 'ubuntu-latest' }} | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install xvfb | |
| xvfb-run pytest ${{ env.PYTEST_ARGS }} | |
| - name: Run tests on Windows or macOS | |
| if: ${{ matrix.os != 'ubuntu-latest' }} | |
| run: | | |
| pytest ${{ env.PYTEST_ARGS }} | |
| - name: Generate line coverage | |
| run: | | |
| coverage report --show-missing | |
| - name: Upload coverage to Coveralls | |
| if: ${{ matrix.os == 'ubuntu-latest' }} | |
| uses: AndreMiras/coveralls-python-action@develop | |
| with: | |
| parallel: true | |
| coveralls-finish: | |
| needs: tests | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Coveralls finished | |
| uses: AndreMiras/coveralls-python-action@develop | |
| with: | |
| parallel-finished: true |