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Merge pull request #114 from adybbroe/add-s3stalker-daemon
Add an s3stalker daemon
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| Original file line number | Diff line number | Diff line change |
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| @@ -1,36 +1,86 @@ | ||
| name: Run tests | ||
| name: CI | ||
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| on: | ||
| - push | ||
| - pull_request | ||
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| jobs: | ||
| build: | ||
| runs-on: ubuntu-latest | ||
| test: | ||
| runs-on: ${{ matrix.os }} | ||
| continue-on-error: ${{ matrix.experimental }} | ||
| strategy: | ||
| fail-fast: true | ||
| matrix: | ||
| python-version: ["3.8", "3.9", "3.10"] | ||
| os: ["ubuntu-latest"] | ||
| python-version: ["3.9", "3.10", "3.11"] | ||
| experimental: [false] | ||
| include: | ||
| - python-version: "3.11" | ||
| os: "ubuntu-latest" | ||
| experimental: true | ||
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| env: | ||
| PYTHON_VERSION: ${{ matrix.python-version }} | ||
| OS: ${{ matrix.os }} | ||
| UNSTABLE: ${{ matrix.experimental }} | ||
| ACTIONS_ALLOW_UNSECURE_COMMANDS: true | ||
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| steps: | ||
| - name: Checkout source | ||
| uses: actions/checkout@v3 | ||
| - name: Set up Python ${{ matrix.python-version }} | ||
| uses: actions/setup-python@v4 | ||
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| - name: Setup Conda Environment | ||
| uses: conda-incubator/setup-miniconda@v2 | ||
| with: | ||
| miniconda-version: "latest" | ||
| python-version: ${{ matrix.python-version }} | ||
| - name: Install dependencies | ||
| mamba-version: "*" | ||
| channels: conda-forge,defaults | ||
| environment-file: continuous_integration/environment.yaml | ||
| activate-environment: test-environment | ||
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| - name: Install unstable dependencies | ||
| if: matrix.experimental == true | ||
| shell: bash -l {0} | ||
| run: | | ||
| pip install -U pytest pytest-cov trollsift netifaces watchdog posttroll pyyaml pyinotify pyresample \ | ||
| pytroll-schedule s3fs fsspec python-dateutil paramiko | ||
| python -m pip install \ | ||
| --no-deps --pre --upgrade \ | ||
| numpy; \ | ||
| python -m pip install \ | ||
| --no-deps --upgrade \ | ||
| git+https://github.com/pytroll/posttroll \ | ||
| git+https://github.com/pytroll/pytroll-schedule \ | ||
| git+https://github.com/pytroll/trollsift; | ||
| - name: Install pytroll-collectors | ||
| run: | | ||
| pip install --no-deps -e . | ||
| - name: Run tests | ||
| - name: Run unit tests | ||
| shell: bash -l {0} | ||
| run: | | ||
| pytest --cov=pytroll_collectors pytroll_collectors/tests --cov-report=xml | ||
| - name: Upload coverage to Codecov | ||
| - name: Upload unittest coverage to Codecov | ||
| uses: codecov/codecov-action@v3 | ||
| with: | ||
| flags: unittests | ||
| file: ./coverage.xml | ||
| env_vars: PYTHON_VERSION | ||
| env_vars: OS,PYTHON_VERSION,UNSTABLE | ||
| fail_ci_if_error: false | ||
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| - name: Coveralls Parallel | ||
| uses: AndreMiras/coveralls-python-action@develop | ||
| with: | ||
| flag-name: run-${{ matrix.test_number }} | ||
| parallel: true | ||
| if: runner.os == 'Linux' | ||
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| coveralls: | ||
| needs: [test] | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Coveralls Finished | ||
| uses: AndreMiras/coveralls-python-action@develop | ||
| with: | ||
| parallel-finished: true |
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,73 @@ | ||
| #!/usr/bin/env python | ||
| # -*- coding: utf-8 -*- | ||
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| # Copyright (c) 2022 Pytroll developers | ||
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| # This program is free software: you can redistribute it and/or modify | ||
| # it under the terms of the GNU General Public License as published by | ||
| # the Free Software Foundation, either version 3 of the License, or | ||
| # (at your option) any later version. | ||
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| # This program is distributed in the hope that it will be useful, | ||
| # but WITHOUT ANY WARRANTY; without even the implied warranty of | ||
| # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the | ||
| # GNU General Public License for more details. | ||
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| # You should have received a copy of the GNU General Public License | ||
| # along with this program. If not, see <http://www.gnu.org/licenses/>. | ||
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| """S3stalker daemon/runner. | ||
| This is a daemon supposed to stay up and running "forever". It will regularly | ||
| fetch fresh filenames from an S3 object store and publish the urls of those new | ||
| filenames. It is a daemon version of the s3stalker.py script which needs to be | ||
| run as a cronjob. | ||
| """ | ||
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| import argparse | ||
| import logging | ||
| import logging.config | ||
| import sys | ||
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| from pytroll_collectors.s3stalker import get_configs_from_command_line | ||
| from pytroll_collectors.s3stalker_daemon_runner import S3StalkerRunner | ||
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| logger = logging.getLogger(__name__) | ||
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| def arg_parse(): | ||
| """Handle input arguments.""" | ||
| parser = argparse.ArgumentParser() | ||
| parser.add_argument("bucket", help="The bucket to retrieve from.") | ||
| parser.add_argument("config", help="Config file to be used") | ||
| parser.add_argument("-l", "--log", | ||
| help="Log configuration file", | ||
| default=None) | ||
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| return parser.parse_args() | ||
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| def main(): | ||
| """Stalk an s3 bucket.""" | ||
| bucket, config, log_config = get_configs_from_command_line() | ||
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| if log_config: | ||
| logging.config.dictConfig(log_config) | ||
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| logger.info("Try start the s3-stalker runner:") | ||
| try: | ||
| s3runner = S3StalkerRunner(bucket, config) | ||
| s3runner.start() | ||
| s3runner.join() | ||
| except KeyboardInterrupt: | ||
| logger.debug("Interrupting") | ||
| except Exception as err: | ||
| logger.error('The S3 Stalker Runner crashed: %s', str(err)) | ||
| sys.exit(1) | ||
| finally: | ||
| s3runner.close() | ||
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| if __name__ == '__main__': | ||
| main() |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,38 @@ | ||
| name: test-environment | ||
| channels: | ||
| - conda-forge | ||
| dependencies: | ||
| - distributed | ||
| - toolz | ||
| - sphinx | ||
| - pyyaml | ||
| - pyproj | ||
| - coveralls | ||
| - coverage | ||
| - codecov | ||
| - behave | ||
| - mock | ||
| - numpy | ||
| - pyresample | ||
| - pyorbital | ||
| - pycrs | ||
| - cartopy | ||
| - geopy | ||
| - freezegun | ||
| - paramiko | ||
| - responses | ||
| - netifaces | ||
| - watchdog | ||
| - s3fs | ||
| - pyinotify | ||
| - requests | ||
| - openssl | ||
| - pytz | ||
| - python-dateutil | ||
| - pytest | ||
| - pytest-cov | ||
| - pip | ||
| - pip: | ||
| - trollsift | ||
| - posttroll | ||
| - pytroll-schedule |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,17 @@ | ||
| version: 1 | ||
| disable_existing_loggers: false | ||
| formatters: | ||
| pytroll: | ||
| format: '[%(asctime)s %(levelname)-8s %(name)s] %(message)s' | ||
| handlers: | ||
| console: | ||
| class: logging.StreamHandler | ||
| level: DEBUG | ||
| formatter: pytroll | ||
| stream: ext://sys.stdout | ||
| loggers: | ||
| posttroll: | ||
| level: INFO | ||
| root: | ||
| level: DEBUG | ||
| handlers: [console] |
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