Merge pull request #579 from knaaptime/infra

overhaul infrastructure

.github/release.yml

@@ -0,0 +1,19 @@
+changelog:
+  exclude:
+    labels:
+      - ignore-for-release
+    authors:
+      - dependabot
+  categories:
+    - title: Bug Fixes
+      labels:
+        - bug
+    - title: Enhancements
+      labels:
+        - enhancement
+    - title: Maintenance
+      labels:
+        - maintenance
+    - title: Other Changes
+      labels:
+        - "*"

.github/workflows/unittests.yml

@@ -1,60 +1,62 @@
- on:
-   push:
-     branches:
-     - '*'
-   pull_request:
-     branches:
-     - '*'
-   schedule:
-     - cron: '59 21 * * *'
-
- jobs:
-   unittests:
-     name: ${{ matrix.os }}, ${{ matrix.environment-file }}
-     runs-on: ${{ matrix.os }}
-     env:
-       FETCH_EXAMPLES: python -c 'import libpysal; libpysal.examples.fetch_all()'
-       RUN_TEST: pytest -v -n 1 libpysal --cov libpysal --cov-config .coveragerc --cov-report xml --color yes --cov-append --cov-report term-missing
-     #timeout-minutes: 25
-     defaults:
+name: Tests
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+    branches:
+      - "*"
+  schedule:
+    - cron: "0 0 * * 1,4"
+
+jobs:
+  Test:
+    name: ${{ matrix.os }}, ${{ matrix.environment-file }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ubuntu-latest]
+        environment-file:
+          - ci/38-minimal.yaml
+          - ci/39.yaml
+          - ci/310.yaml
+          - ci/311.yaml
+          - ci/311-dev.yaml
+          - ci/311-no-optional.yaml
+        include:
+          - environment-file: ci/310.yaml
+            os: macos-latest
+          - environment-file: ci/310.yaml
+            os: windows-latest
+    defaults:
       run:
         shell: bash -l {0}
-     strategy:
-       matrix:
-         os: ['ubuntu-latest']
-         environment-file: [
-            ci/38-minimal.yaml,
-            ci/39.yaml,
-            ci/310.yaml,
-            ci/311.yaml,
-            ci/311-no-optional.yaml,
-            ci/311-dev.yaml
-         ]
-         include:
-           - environment-file: ci/311.yaml
-             os: macos-latest
-           - environment-file: ci/311.yaml
-             os: windows-latest
-       fail-fast: false
-
-     steps:
-       - name: checkout repo
-         uses: actions/checkout@v4
-
-       - name: setup micromamba
-         uses: mamba-org/setup-micromamba@v1
-         with:
-           environment-file: ${{ matrix.environment-file }}
-           micromamba-version: 'latest'
-
-       - name: run tests
-         run: |
-           ${{ env.FETCH_EXAMPLES }}
-           ${{ env.RUN_TEST }}
-
-       - name: codecov
-         uses: codecov/codecov-action@v3
-         with:
-           token: ${{ secrets.CODECOV_TOKEN }}
-           file: ./coverage.xml
-           name: libpysal-codecov
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - name: setup micromamba
+        uses: mamba-org/setup-micromamba@v1
+        with:
+          environment-file: ${{ matrix.environment-file }}
+          micromamba-version: "latest"
+
+      - name: Install libpysal
+        run: pip install .; python -c 'import libpysal; libpysal.examples.fetch_all()'
+
+      - name: Test libpysal
+        run: |
+          pytest -v --color yes --cov libpysal --cov-append --cov-report term-missing --cov-report xml .
+
+      - uses: codecov/codecov-action@v3
+
+      - name: Generate and publish the report
+        if: |
+          failure()
+          && steps.status.outcome == 'failure'
+          && github.event_name == 'schedule'
+          && github.repository_owner == 'pysal'
+        uses: xarray-contrib/issue-from-pytest-log@v1
+        with:
+          log-path: pytest-log.jsonl

THANKS.txt

@@ -11,10 +11,13 @@ Pedro Amaral
 Luc Anselin
 Jotham Apaloo
 Daniel Arribas-Bel
+Martin Fleischmann
 David C. Folch
+James Gaboardi
 Forest Gregg
 Myunghwa Hwang
 Wei Kang
+Eli Knaap
 Marynia Kolak
 Julia Koschinsky
 Jason Laura

docs/conf.py

@@ -16,12 +16,7 @@
 # add these directories to sys.path here. If the directory is relative to the
 # documentation root, use os.path.abspath to make it absolute, like shown here.
 #
-import sys, os
 import sphinx_bootstrap_theme
-
-
-sys.path.insert(0, os.path.abspath("../"))
-
 import libpysal
 
 
@@ -210,8 +205,8 @@
     (
         master_doc,
         "%s.tex" % project,
-        u"%s Documentation" % project,
-        u"pysal developers",
+        "%s Documentation" % project,
+        "pysal developers",
         "manual",
     ),
 ]
@@ -221,7 +216,7 @@
 
 # One entry per manual page. List of tuples
 # (source start file, name, description, authors, manual section).
-man_pages = [(master_doc, project, u"%s Documentation" % project, [author], 1)]
+man_pages = [(master_doc, project, "%s Documentation" % project, [author], 1)]
 
 
 # -- Options for Texinfo output -------------------------------------------
@@ -233,7 +228,7 @@
     (
         master_doc,
         project,
-        u"%s Documentation" % project,
+        "%s Documentation" % project,
         author,
         project,
         "One line description of project.",