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Remove conda default channel #326

Merged
merged 1 commit into from
Aug 27, 2024
Merged

Remove conda default channel #326

merged 1 commit into from
Aug 27, 2024

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jan-janssen
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@jan-janssen jan-janssen commented Aug 27, 2024

Summary by CodeRabbit

  • New Features
    • Introduced a new step to create a .condarc file for Conda channel configuration across various workflows.
  • Improvements
    • Streamlined Conda setup by consolidating parameters and utilizing the latest Miniforge version.
    • Enhanced clarity and maintainability of workflow configurations by centralizing channel information.
  • Bug Fixes
    • Removed deprecated parameters to improve compatibility and reduce errors in the setup process.

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coderabbitai bot commented Aug 27, 2024

Walkthrough

The changes involve modifications to several GitHub Actions workflow files to streamline the setup of Conda environments. Key alterations include the introduction of a .condarc file for channel configuration, the replacement of the miniforge-variant parameter with miniforge-version, and the removal of several parameters such as channels and activate-environment. This results in a more organized and simplified configuration across the workflows.

Changes

Files Change Summary
.github/workflows/coverage.yml Updated to use miniforge-version: latest and added condarc-file: .condarc. Removed various parameters related to Mambaforge setup.
.github/workflows/deploy.yml Added step for .condarc file creation and updated parameters to use miniforge-version: latest and condarc-file: .condarc. Removed redundant parameters.
.github/workflows/mini.yml Introduced .condarc file, replaced miniforge-variant with miniforge-version: latest, and removed several parameters for simplification.
.github/workflows/notebooks.yml Added .condarc file creation step, replaced miniforge-variant with miniforge-version: latest, and removed unnecessary parameters.
.github/workflows/pypicheck.yml Added step for .condarc file creation and updated miniforge-version to latest, removing redundant parameters.
.github/workflows/unittest.yml New step for .condarc file creation added; updated to use miniforge-version: latest and removed several parameters.
.github/workflows/unittests_old.yml Added step for .condarc creation, replaced miniforge-variant with miniforge-version: latest, and removed unnecessary parameters.

Sequence Diagram(s)

sequenceDiagram
    participant CI as CI/CD Pipeline
    participant Conda as Conda Setup
    participant Env as Environment

    CI->>Conda: Setup Conda Environment
    Conda->>Env: Create .condarc file
    Env-->>Conda: Channel Configured
    Conda->>Env: Install Dependencies
Loading

🐰 In the meadow, hopping around,
New configs make the setup sound.
With .condarc in play,
Simplified all the way,
For bunnies who code, joy knows no bound!
🌼


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Actionable comments posted: 1

Review details

Configuration used: CodeRabbit UI
Review profile: CHILL

Commits

Files that changed from the base of the PR and between bfd0ef9 and 4a65a1b.

Files selected for processing (7)
  • .github/workflows/coverage.yml (1 hunks)
  • .github/workflows/deploy.yml (1 hunks)
  • .github/workflows/mini.yml (1 hunks)
  • .github/workflows/notebooks.yml (1 hunks)
  • .github/workflows/pypicheck.yml (1 hunks)
  • .github/workflows/unittest.yml (1 hunks)
  • .github/workflows/unittests_old.yml (1 hunks)
Additional comments not posted (19)
.github/workflows/pypicheck.yml (3)

17-18: LGTM!

The addition of the Conda config step ensures that the Conda environment uses the specified channel, improving clarity and maintainability.

The code changes are approved.


23-24: LGTM!

The update to the Mambaforge setup parameters streamlines the setup process by consolidating channel information into the .condarc file, improving maintainability and clarity.

The code changes are approved.


24-24: LGTM!

The addition of the condarc-file parameter ensures that the Conda environment uses the configuration specified in the .condarc file, improving clarity and maintainability.

The code changes are approved.

.github/workflows/unittests_old.yml (3)

16-17: LGTM!

The addition of the Conda config step ensures that the Conda environment uses the specified channel, improving clarity and maintainability.

The code changes are approved.


22-23: LGTM!

The update to the Mambaforge setup parameters streamlines the setup process by consolidating channel information into the .condarc file, improving maintainability and clarity.

The code changes are approved.


23-23: LGTM!

The addition of the condarc-file parameter ensures that the Conda environment uses the configuration specified in the .condarc file, improving clarity and maintainability.

The code changes are approved.

.github/workflows/notebooks.yml (3)

19-19: LGTM!

The addition of the Conda config step ensures that the Conda environment uses the specified channel, improving clarity and maintainability.

The code changes are approved.


24-25: LGTM!

The update to the Mambaforge setup parameters streamlines the setup process by consolidating channel information into the .condarc file, improving maintainability and clarity.

The code changes are approved.


25-25: LGTM!

The addition of the condarc-file parameter ensures that the Conda environment uses the configuration specified in the .condarc file, improving clarity and maintainability.

The code changes are approved.

.github/workflows/mini.yml (3)

23-23: LGTM!

Creating a .condarc file with the conda-forge channel simplifies the channel configuration.

The code changes are approved.


28-28: LGTM!

Replacing miniforge-variant with miniforge-version: latest ensures the use of the latest Mambaforge version.

The code changes are approved.


29-29: LGTM!

Adding the condarc-file parameter to point to the .condarc file centralizes the channel configuration.

The code changes are approved.

.github/workflows/deploy.yml (3)

22-23: LGTM!

Creating a .condarc file with the conda-forge channel simplifies the channel configuration.

The code changes are approved.


27-27: LGTM!

Replacing miniforge-variant with miniforge-version: latest ensures the use of the latest Mambaforge version.

The code changes are approved.


28-28: LGTM!

Adding the condarc-file parameter to point to the .condarc file centralizes the channel configuration.

The code changes are approved.

.github/workflows/coverage.yml (3)

24-24: LGTM!

Creating a .condarc file with the conda-forge channel simplifies the channel configuration.

The code changes are approved.


29-29: LGTM!

Replacing miniforge-variant with miniforge-version: latest ensures the use of the latest Mambaforge version.

The code changes are approved.


30-30: LGTM!

Adding the condarc-file parameter to point to the .condarc file centralizes the channel configuration.

The code changes are approved.

.github/workflows/unittest.yml (1)

44-45: LGTM!

The changes streamline the configuration by centralizing channel management within the .condarc file and updating the setup parameters for Mambaforge.

Comment on lines +37 to +39
- name: Conda config
shell: bash -l {0}
run: echo -e "channels:\n - conda-forge\n" > .condarc
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Improve readability and maintainability of the .condarc file creation.

Instead of using echo -e, consider using a heredoc for better readability and maintainability.

-        run: echo -e "channels:\n  - conda-forge\n" > .condarc
+        run: |
+          cat <<EOF > .condarc
+          channels:
+            - conda-forge
+          EOF
Committable suggestion

‼️ IMPORTANT
Carefully review the code before committing. Ensure that it accurately replaces the highlighted code, contains no missing lines, and has no issues with indentation. Thoroughly test & benchmark the code to ensure it meets the requirements.

Suggested change
- name: Conda config
shell: bash -l {0}
run: echo -e "channels:\n - conda-forge\n" > .condarc
- name: Conda config
shell: bash -l {0}
run: |
cat <<EOF > .condarc
channels:
- conda-forge
EOF

@jan-janssen jan-janssen merged commit 424a2f6 into main Aug 27, 2024
17 checks passed
@jan-janssen jan-janssen deleted the nodev branch August 27, 2024 08:50
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1 participant