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channels: | ||
- conda-forge | ||
dependencies: | ||
- jupyter | ||
- papermill |
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# This workflow is used to test, if the code is compatible with jupyter notebooks providing usage examples | ||
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name: Notebooks | ||
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on: | ||
push: | ||
branches: [ main ] | ||
pull_request: | ||
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jobs: | ||
build: | ||
runs-on: ubuntu-latest | ||
steps: | ||
- uses: actions/checkout@v4 | ||
- name: Merge Notebook environment | ||
run: | | ||
cp binder/environment.yml environment.yml | ||
tail --lines=+4 .ci_support/environment-notebooks.yml >> environment.yml | ||
- name: Setup Mambaforge | ||
uses: conda-incubator/setup-miniconda@v2 | ||
with: | ||
python-version: "3.12" | ||
miniforge-variant: Mambaforge | ||
channels: conda-forge | ||
channel-priority: strict | ||
activate-environment: my-env | ||
environment-file: environment.yml | ||
use-mamba: true | ||
- name: Install | ||
shell: bash -l {0} | ||
run: | | ||
pip install versioneer[toml]==0.29 | ||
pip install . --no-deps --no-build-isolation | ||
- name: Notebooks | ||
shell: bash -l {0} | ||
run: > | ||
flux start | ||
papermill notebooks/examples.ipynb examples-out.ipynb -k "python3" |