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Merge pull request #329 from pyiron/dependabot/pip/pylammpsmpi-0.2.24
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Bump pylammpsmpi from 0.2.23 to 0.2.24
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jan-janssen authored Aug 24, 2024
2 parents 0293710 + 25a2094 commit ddbdefe
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Showing 9 changed files with 11 additions and 11 deletions.
2 changes: 1 addition & 1 deletion .ci_support/environment-docs.yml
Original file line number Diff line number Diff line change
Expand Up @@ -16,6 +16,6 @@ dependencies:
- seekpath =2.1.0
- lammps =2024.06.27
- pandas =2.2.2
- pylammpsmpi =0.2.23
- pylammpsmpi =0.2.24
- jinja2 =3.1.4
- jupyter-book =1.0.0
2 changes: 1 addition & 1 deletion .ci_support/environment-lammps.yml
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Expand Up @@ -4,7 +4,7 @@ dependencies:
- lammps =2024.06.27=*openmpi*
- openmpi =4.1.6
- pandas =2.2.2
- pylammpsmpi =0.2.23
- pylammpsmpi =0.2.24
- jinja2 =3.1.4
- iprpy-data =2023.07.25
- dynaphopy =1.17.16
2 changes: 1 addition & 1 deletion .ci_support/environment-notebooks.yml
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Expand Up @@ -6,6 +6,6 @@ dependencies:
- gpaw =24.6.0
- lammps =2024.06.27
- pandas =2.2.2
- pylammpsmpi =0.2.23
- pylammpsmpi =0.2.24
- jinja2 =3.1.4
- dynaphopy =1.17.16
4 changes: 2 additions & 2 deletions atomistics/calculators/lammps/calculator.py
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Expand Up @@ -477,7 +477,7 @@ def evaluate_with_lammps(
logger=None,
log_file=None,
library=None,
diable_log_file: bool = True,
disable_log_file: bool = True,
lmp_optimizer_kwargs={},
) -> dict:
lmp = LammpsASELibrary(
Expand All @@ -487,7 +487,7 @@ def evaluate_with_lammps(
logger=logger,
log_file=log_file,
library=library,
diable_log_file=diable_log_file,
disable_log_file=disable_log_file,
)
results_dict = evaluate_with_lammps_library(
task_dict=task_dict,
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2 changes: 1 addition & 1 deletion atomistics/calculators/lammps/phonon.py
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Expand Up @@ -124,7 +124,7 @@ def calc_molecular_dynamics_phonons_with_lammps(
potential_dataframe=potential_dataframe,
input_template=None,
lmp=None,
diable_log_file=False,
disable_log_file=False,
working_directory=".",
)
(
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2 changes: 1 addition & 1 deletion binder/environment.yml
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Expand Up @@ -11,7 +11,7 @@ dependencies:
- gpaw =24.6.0
- lammps =2024.06.27
- pandas =2.2.2
- pylammpsmpi =0.2.23
- pylammpsmpi =0.2.24
- jinja2 =3.1.4
- dynaphopy =1.17.16
- tqdm =4.66.5
2 changes: 1 addition & 1 deletion notebooks/free_energy_calculation.ipynb
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Expand Up @@ -627,7 +627,7 @@
" logger=None,\n",
" log_file=None,\n",
" library=None,\n",
" diable_log_file=True,\n",
" disable_log_file=True,\n",
" )\n",
" for i in tqdm(steps_lst):\n",
" task_dict = workflow_md_thermo.generate_structures()\n",
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2 changes: 1 addition & 1 deletion notebooks/lammps_workflows.ipynb
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Expand Up @@ -730,7 +730,7 @@
" logger=None,\n",
" log_file=None,\n",
" library=None,\n",
" diable_log_file=True,\n",
" disable_log_file=True,\n",
")\n",
"eng_pot_lst, eng_kin_lst = [], []\n",
"for i in range(steps):\n",
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4 changes: 2 additions & 2 deletions pyproject.toml
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Expand Up @@ -46,12 +46,12 @@ gpaw = [
"gpaw==24.6.0",
]
lammps = [
"pylammpsmpi==0.2.23",
"pylammpsmpi==0.2.24",
"jinja2==3.1.4",
"pandas==2.2.2",
]
lammps_phonons = [
"pylammpsmpi==0.2.23",
"pylammpsmpi==0.2.24",
"jinja2==3.1.4",
"pandas==2.2.2",
"dynaphopy==1.17.16",
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