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Update index.js
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mbaudis committed Jul 22, 2024
1 parent 520cb90 commit 72412c3
Showing 1 changed file with 11 additions and 2 deletions.
13 changes: 11 additions & 2 deletions src/pages/index.js
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import { Layout } from "../components/Layout"
import Panel from "../components/Panel"
import { SubsetHistogram } from "../components/SVGloaders"
import { SubsetHistogram, BiosamplePlot } from "../components/SVGloaders"
// import { InternalLink } from "../components/helpersShared/linkHelpers"
import React from "react"
import { SITE_DEFAULTS } from "../hooks/api"
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<SubsetHistogram datasetIds={SITE_DEFAULTS.DATASETID} id="DRAGEN-CNV" />
</p>
<p>
... under construction ...
The repository contains CNV tracks for many of teh 1000 Genomes samples analyzed
by different platforms or data pipelines and therefore allows to compare
private analysis data to results from these different call sets, to avoid
interpretation biases from using reference data with a different analysis
profile from the one used in your study. The plot below shows analysis specific
CNV tracks for chromosome 13 in the HG01572 sample from the 1000 Genomes set,
for several calling pipelines.
<BiosamplePlot biosid="onekgbs-HG01572" datasetIds={SITE_DEFAULTS.DATASETID} plotChros="13" />
Please be aware that the small size of most CNVs is not correctly represented
at this zoom level (overplotting due to limited resolution).
</p>
</Panel>
</Layout>
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