QC for GC

[petrelharp]

I've not tested the maintence script! In fact, I wonder if we want to do that change at all - there's a number of special-case things that we might need to QC - e.g., bacterial_recombination - and we don't want to put all of them in the template (or, it'd be a bother to).

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 99.84%. Comparing base (0ab99e0) to head (470c1c9).

Additional details and impacted files

@@           Coverage Diff           @@
##             main    #1662   +/-   ##
=======================================
  Coverage   99.84%   99.84%           
=======================================
  Files         136      136           
  Lines        4653     4653           
  Branches      468      468           
=======================================
  Hits         4646     4646           
  Misses          3        3           
  Partials        4        4           

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