Add CI pipeline file

.github/workflows/main.yml

@@ -0,0 +1,192 @@
+name: Github Action
+
+on:
+  push:
+    branches: [main, develop]
+    paths-ignore: # prevents workflow execution when only these types of files are modified
+      - "**.md" # wildcards prevent file in any repo dir from trigering workflow
+      - "**.bib"
+      - "**.ya?ml" # captures both .yml and .yaml
+      - "LICENSE"
+      - ".gitignore"
+  pull_request:
+    branches: [main, develop]
+    types: [opened, reopened] # excludes syncronize to avoid redundant trigger from commits on PRs
+    paths-ignore:
+      - "**.md"
+      - "**.bib"
+      - "**.ya?ml"
+      - "LICENSE"
+      - ".gitignore"
+  workflow_dispatch: # also allow manual trigger, for testing purposes
+
+jobs:
+  clean:
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - name: Black formatting
+        uses: lgeiger/[email protected]
+        with:
+          args: "./"
+
+      - name: Run isort
+        uses: jamescurtin/isort-action@master
+        with:
+          configuration: --profile black
+
+      - name: Check for modified files
+        id: git-check
+        run: echo ::set-output name=modified::$(if git diff-index --quiet HEAD --; then echo "false"; else echo "true"; fi)
+
+      - name: Push changes
+        if: steps.git-check.outputs.modified == 'true'
+        run: |
+          git checkout $GITHUB_HEAD_REF
+          git commit -am "Black reformating"
+          git push
+
+  build:
+    runs-on: ${{ matrix.os }}
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ ubuntu-latest, windows-latest, macos-13, ubuntu-20.04, macos-latest, windows-2019 ]
+        py-version: [ "3.9", "3.10", "3.11", "3.12" ]
+
+    steps:
+      - uses: actions/checkout@v4
+
+      # general Python setup
+      - name: Set up Python ${{ matrix.py-version }}
+        uses: actions/setup-python@v5
+        with:
+          python-version: ${{ matrix.py-version }}
+
+      - name: Update pip & install testing pkgs
+        run: |
+          python -VV
+          python -m pip install --upgrade pip setuptools wheel
+
+      # install testing
+      - name: Install package and test deps
+        run: |
+          pip install .[testing] # install the package and the testing deps
+
+      - name: Test with pytest
+        run: |
+          pytest
+
+      - name: Upload coverage reports to Codecov
+        uses: codecov/codecov-action@v4
+
+  Pypi:
+    runs-on: ubuntu-latest
+    needs: build
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os: [ "ubuntu-latest" ]
+        python-version: ["3.11" ]
+
+    steps:
+      - uses: actions/checkout@v2
+
+      - name: Install pypa/build
+        run: >-
+          python -m
+          pip install
+          build
+          --user
+
+      - name: Build a binary wheel and a source tarball
+        run: >-
+          python -m
+          build
+
+      - name: Publish distribution 📦 to PyPI if Release
+        if: startsWith(github.ref, 'refs/tags')
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          password: ${{ secrets.PYPI_API_TOKEN }}
+          skip-existing: true
+
+      - name: Publish distribution 📦 to Test PyPI if Push
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          password: ${{ secrets.TEST_PYPI_API_TOKEN }}
+          repository-url: https://test.pypi.org/legacy/
+          skip-existing: true
+
+  conda:
+    name: (${{ matrix.python-version }}, ubuntu-latest)
+    runs-on: ubuntu-latest
+    needs: build
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os: ["ubuntu-latest"]
+        python-version: ["3.11"]
+    steps:
+      - uses: actions/checkout@v2
+      - uses: conda-incubator/setup-miniconda@v3
+        with:
+          python-version: ${{ matrix.python-version }}
+          channels: conda-forge,cmutel,konstantinstadler,haasad,pascallesage,romainsacchi
+          allow-softlinks: true
+          channel-priority: strict
+          auto-update-conda: true
+          activate-environment: test
+
+      - name: Conda info
+        shell: bash -l {0}
+        run: conda info
+
+      - name: Publish distribution 📦 to Anaconda if Push and if master branch
+        if: startsWith(github.ref, 'refs/heads/master')
+        shell: bash -l {0}
+
+        run: |
+
+          PKG_NAME=dopo
+          USER=romainsacchi
+          conda install anaconda-client
+          conda install conda-build
+          mkdir ~/conda-bld
+          conda config --set anaconda_upload no
+          export CONDA_BLD_PATH=~/conda-bld
+          export VERSION=`date +%Y.%m.%d`
+          conda build "conda/" --old-build-string
+          ls $CONDA_BLD_PATH/noarch/
+          anaconda -t ${{ secrets.ANACONDA_CLOUD }} upload -u $USER $CONDA_BLD_PATH/noarch/$PKG_NAME-$VERSION-py_0.tar.bz2 --force
+
+  testconda:
+    name: (${{ matrix.python-version }}, ${{ matrix.os }})
+    runs-on: ${{ matrix.os }}
+    needs: conda
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os: ["ubuntu-latest"]
+        python-version: ["3.11",]
+        solver: ["classic"]
+    steps:
+      - uses: actions/checkout@v4
+      - uses: conda-incubator/setup-miniconda@v3
+        with:
+          python-version: ${{ matrix.python-version }}
+          channels: conda-forge,romainsacchi
+          allow-softlinks: true
+          auto-update-conda: true
+          activate-environment: test
+          conda-solver: ${{ matrix.solver }}
+
+      - name: Pull distribution 📦 from Anaconda and test it if master branch
+
+        run: |
+          conda install romainsacchi::dopo