Merge pull request #154 from piLaboratory/dev

v0..6.2
piLaboratory · Jan 17, 2024 · bb264a1 · bb264a1
2 parents d435e99 + 240ae33
commit bb264a1
Show file tree

Hide file tree

Showing 5 changed files with 17 additions and 8 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Package: sads
 Type: Package
 Title: Maximum Likelihood Models for Species Abundance Distributions
-Version: 0.6.0
+Version: 0.6.3
 Date: 2024-01-16
 Author: Paulo I. Prado, Murilo Dantas Miranda and Andre Chalom
 Maintainer: Paulo I. Prado <[email protected]>
@@ -25,6 +25,6 @@ Description: Maximum likelihood tools to fit and compare models of species
 License: GPL-2
 LazyData: true
 Encoding: UTF-8
-URL: http://piLaboratory.github.io/sads, https://github.com/piklprado/sads
+URL: https://github.com/piLaboratory/sads
 BugReports: https://github.com/piLaboratory/sads/issues
 RoxygenNote: 7.2.3
diff --git a/README.md b/README.md
@@ -1,5 +1,5 @@
 # sads
-[![Travis-CI Build Status](https://travis-ci.org/piLaboratory/sads.svg?branch=master)](https://travis-ci.org/piLaboratory/sads)
+[![Travis-CI Build Status](https://app.travis-ci.org/piLaboratory/sads.svg?branch=master)](https://app.travis-ci.com/piLaboratory/sads)
 [![AppVeyor Build Status](https://ci.appveyor.com/api/projects/status/github/piLaboratory/sads?branch=master&svg=true)](https://ci.appveyor.com/project/piLaboratory/sads)
 [![CRAN Status](https://img.shields.io/cran/v/sads.svg)](https://cran.r-project.org/package=sads)
 

diff --git a/man/dzipf.Rd b/man/dzipf.Rd
@@ -78,7 +78,7 @@ rzipf( n, N, s)
 
   Li, W. (2002) Zipf's Law everywhere. \emph{Glottometrics} 5:14-21
   
-  Zipf's Law. \url{http://en.wikipedia.org/wiki/Zipf's_law}.
+  Zipf's Law. \url{https://en.wikipedia.org/wiki/Zipf's_law}.
 }
 
 \author{Paulo I Prado \email{[email protected]} and Murilo Dantas Miranda.}

diff --git a/man/plotprofmle.Rd b/man/plotprofmle.Rd
@@ -17,8 +17,12 @@
 }
 
 \section{Methods}{\describe{
-\item{code{signature(object="profile.mle2")}}{The preferred invocation for these methods.}
-\item{code{signature(object="mle2")}}{A convenience wrapper that calls \code{profile} on the mle2 object and runs the former method.}
+\item{plotprofmle}{\code{signature(object="profile.mle2")}:The preferred invocation for these methods.}
+\item{plotprofmle}{\code{signature(object="mle2")}:A convenience wrapper
+  that calls \code{profile} on the mle2 object and runs the former
+  method.}
+\item{likelregions}{\code{signature(object="profile.mle2")}:The preferred invocation for these methods.}
+\item{likelregions}{\code{signature(object="mle2")}:A convenience wrapper that calls \code{profile} on the mle2 object and runs the former method.}
 }}
 
 \usage{

diff --git a/man/sads-package.Rd b/man/sads-package.Rd
@@ -52,9 +52,14 @@ Maintainer: \packageMaintainer{sads}
   \emph{Journal of Animal Ecology, 82}(4): 721--738.
 }
 
+\keyword{distribution}
+\keyword{models}
+\concept{species abundance distributions}
+\concept{ecology}
+\concept{environmetrics}
+\concept{maximum likelihood estimation}
+
 
-\keyword{ species abundance distributions, ecology, environmetrics,
-  maximum likelihood estimation }
 
 \seealso{
   vignettes of \pkg{sads}; \code{vegan-package} and \code{poilog-package}