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Add CI/CD workflow #7

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@chaichontat chaichontat commented Sep 1, 2021 •
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Check that the codebase still works every 24 hours.

  • Run synthetic data
  • Process raw neuropixels data w/ MATLAB
  • Run neuropixels dimension reduction

The resulting notebook (run_bubblewrap.py) along with results would be deployed to the GitHub Pages associated with this repository.

@chaichontat
Add save option to make_dataset
a0704fc 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Add test_make_dataset
03a2775 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Add CPU environment
bbd3882 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Change mpl backend to default
1b83577 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Cut run by 10-fold
e9096e5 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Add workflow.
0989b69 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat chaichontat requested a review from draelos September 1, 2021 13:04
@chaichontat
Add ephysLoad.m
99234bb 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Make ephysload usable
b42bb68 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat chaichontat force-pushed the github_actions branch 3 times, most recently from 0058caa to da7a3d2 Compare September 2, 2021 01:17
@chaichontat
Add dimension reduction
32e78c7 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Fix dimension_reduction path
ed6ed21 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Add upload artifact
0262b41 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat
Deploy in this PR
ef736c1 
Signed-off-by: Chaichontat Sriworarat <[email protected]>
@chaichontat chaichontat marked this pull request as ready for review September 8, 2021 15:10
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