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1.10.1

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@github-actions github-actions released this 05 Nov 15:57
· 29 commits to main since this release
31c905d

This release was a big internal refactor and didn't feel like enough visible changes were present to release it as 1.11, so it's named 1.10.1 instead

Internal

  • some of the simpler file validations moved to the command-line parsing part of harpy #159
  • [hpc] has much less redundant code

New Features

  • All workflows with an --extra-params option now have some program-specific argument validation #158
  • --snakemake now has validations
  • --hpc now has validations
  • [align ema] made read fragment density optimization off by default and is now exposed as a command-line argument to toggle on

Other changes

  • [hpc] now checks if the executor plugin is installed and only prints the notice if it isn't
  • [stitchparams] and [popgroup] have slightly nicer printing

Full Changelog: 1.10...1.10.1