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Test Harpy Modules

Singularity #81

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Singularity

Singularity #81

Triggered via pull request May 7, 2024 17:43
@pdimenspdimens
synchronize #77
singularity
Status Failure
Total duration 34m 23s
Artifacts 1

tests.yml

on: pull_request
detect file changes
6s
detect file changes
harpy installation
8m 13s
harpy installation
test demux gen1
13m 53s
test demux gen1
test preflight
11m 14s
test preflight
test qc
12m 54s
test qc
test align BWA
14m 23s
test align BWA
test align EMA
11m 28s
test align EMA
test align minimap
17m 5s
test align minimap
test mpileup
8m 8s
test mpileup
test freebayes
20m 39s
test freebayes
test impute
16m 37s
test impute
test phase
18m 24s
test phase
test sv leviathan
14m 0s
test sv leviathan
test sv naibr
23m 33s
test sv naibr
test simulate variants
25m 48s
test simulate variants
test simulate linkedreads
1m 24s
test simulate linkedreads
test harpy extras
0s
test harpy extras
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Annotations

1 error and 1 warning
test simulate linkedreads
Process completed with exit code 1.
detect file changes
'base' input parameter is ignored when action is triggered by pull request event

Artifacts

Produced during runtime
Name Size
deps-image Expired
1.2 GB