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Test Harpy Modules

Singularity #80

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Singularity

Singularity #80

Triggered via pull request May 7, 2024 16:01
@pdimenspdimens
synchronize #77
singularity
Status Failure
Total duration 39m 5s
Artifacts 1

tests.yml

on: pull_request
detect file changes
10s
detect file changes
harpy installation
8m 22s
harpy installation
test demux gen1
13m 59s
test demux gen1
test preflight
11m 44s
test preflight
test qc
13m 1s
test qc
test align BWA
14m 35s
test align BWA
test align EMA
11m 40s
test align EMA
test align minimap
9m 5s
test align minimap
test mpileup
8m 1s
test mpileup
test freebayes
21m 30s
test freebayes
test impute
16m 42s
test impute
test phase
30m 21s
test phase
test sv leviathan
14m 32s
test sv leviathan
test sv naibr
24m 25s
test sv naibr
test simulate variants
25m 41s
test simulate variants
test simulate linkedreads
1m 11s
test simulate linkedreads
test harpy extras
0s
test harpy extras
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1 error and 1 warning
test simulate linkedreads
Process completed with exit code 1.
detect file changes
'base' input parameter is ignored when action is triggered by pull request event

Artifacts

Produced during runtime
Name Size
deps-image Expired
1.2 GB