Skip to content
Test Harpy Modules

Singularity #74

Sign in to view logs

Singularity

Singularity #74

Triggered via pull request May 6, 2024 19:49
@pdimenspdimens
synchronize #77
singularity
Status Cancelled
Total duration 20m 53s
Artifacts 1

tests.yml

on: pull_request
detect file changes
7s
detect file changes
harpy installation
8m 20s
harpy installation
test demux gen1
46s
test demux gen1
test preflight
7m 11s
test preflight
test qc
7m 10s
test qc
test align BWA
2m 30s
test align BWA
test align EMA
2m 28s
test align EMA
test align minimap
2m 30s
test align minimap
test mpileup
2m 28s
test mpileup
test freebayes
2m 33s
test freebayes
test impute
7m 10s
test impute
test phase
7m 10s
test phase
test sv leviathan
7m 10s
test sv leviathan
test sv naibr
7m 10s
test sv naibr
test simulate variants
29s
test simulate variants
test simulate linkedreads
2m 27s
test simulate linkedreads
test harpy extras
0s
test harpy extras
Fit to window
Zoom out
Zoom in

Annotations

29 errors and 7 warnings
test simulate variants
Process completed with exit code 1.
test simulate variants
Process completed with exit code 1.
test simulate variants
Process completed with exit code 1.
test simulate variants
Process completed with exit code 1.
test demux gen1
Process completed with exit code 1.
test align EMA
The run was canceled by @pdimens.
test align EMA
The operation was canceled.
test simulate linkedreads
The run was canceled by @pdimens.
test simulate linkedreads
The operation was canceled.
test align BWA
The run was canceled by @pdimens.
test align BWA
The operation was canceled.
test mpileup
The run was canceled by @pdimens.
test mpileup
The operation was canceled.
test align minimap
The run was canceled by @pdimens.
test align minimap
The operation was canceled.
test freebayes
The run was canceled by @pdimens.
test freebayes
The operation was canceled.
test phase
The run was canceled by @pdimens.
test phase
The operation was canceled.
test impute
The run was canceled by @pdimens.
test impute
The operation was canceled.
test sv leviathan
The run was canceled by @pdimens.
test sv naibr
The run was canceled by @pdimens.
test sv leviathan
The operation was canceled.
test sv naibr
The operation was canceled.
test qc
The run was canceled by @pdimens.
test qc
The operation was canceled.
test preflight
The run was canceled by @pdimens.
test preflight
The operation was canceled.
detect file changes
'base' input parameter is ignored when action is triggered by pull request event
test phase
Runner GitHub Actions 12 did not respond to a cancelation request with 00:05:00.
test impute
Runner GitHub Actions 11 did not respond to a cancelation request with 00:05:00.
test sv leviathan
Runner GitHub Actions 20 did not respond to a cancelation request with 00:05:00.
test sv naibr
Runner GitHub Actions 3 did not respond to a cancelation request with 00:05:00.
test qc
Runner GitHub Actions 15 did not respond to a cancelation request with 00:05:00.
test preflight
Runner GitHub Actions 6 did not respond to a cancelation request with 00:05:00.

Artifacts

Produced during runtime
Name Size
deps-image Expired
1.2 GB