Test Harpy Modules

fix handling of reports for no variants #481

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Run time

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Job	Run time
Detect File Changes	8s
Build/Cache Container	13m 47s
align BWA	0s
metassembly	0s
demux gen1	0s
deconvolve	0s
align EMA	0s
harpy extras	0s
freebayes	0s
impute	0s
sv leviathan	21m 37s
sv naibr	39m 8s
mpileup	0s
phase	0s
preflight	0s
qc	0s
simulate linkedreads	0s
simulate variants	0s
align strobe	0s
	1h 14m 40s