Test Harpy Modules

Hotfixes #376

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Run time

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Job	Run time
Detect File Changes	5s
Build/Cache Container	17m 24s
align BWA	10m 35s
deconvolve	5m 15s
demux gen1	5m 6s
metassembly	23m 16s
align EMA	15m 3s
freebayes	30m 50s
harpy extras	0s
impute	27m 22s
mpileup	10m 23s
sv leviathan	16m 33s
sv naibr	26m 45s
phase	22m 0s
preflight	7m 55s
simulate linkedreads	16m 8s
qc	13m 0s
simulate variants	31m 6s
align strobe	9m 4s
	4h 47m 50s