Test Harpy Modules

Merge pull request #146 from pdimens/cloudspades #365

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Run time

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Job	Run time
Detect File Changes	3s
Build/Cache Container	17m 43s
align BWA	7m 54s
deconvolve	6m 6s
metassembly	23m 21s
demux gen1	11m 20s
align EMA	13m 26s
harpy extras	30s
freebayes	25m 20s
impute	21m 13s
sv leviathan	16m 20s
mpileup	10m 11s
sv naibr	27m 18s
phase	22m 11s
preflight	7m 19s
qc	13m 9s
simulate linkedreads	16m 16s
simulate variants	30m 53s
align strobe	12m 27s
	4h 43m 0s