Test Harpy Modules

add a progress bar #256

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Run time

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Job	Run time
Detect File Changes	5s
Build/Cache Container	9m 14s
preflight	8m 16s
qc	12m 25s
demux gen1	16m 12s
align BWA	8m 43s
deconvolve	5m 37s
freebayes	24m 4s
align EMA	12m 45s
impute	18m 43s
mpileup	11m 14s
phase	20m 28s
align strobe	8m 3s
sv leviathan	50s
sv naibr	25m 28s
simulate linkedreads	16m 0s
simulate variants	27m 52s
harpy extras	0s
	3h 45m 59s