Test Harpy Modules

fixes #214

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Run time

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Job	Run time
Detect File Changes	6s
Build/Cache Container	9m 8s
demux gen1	18m 10s
deconvolve	5m 44s
align BWA	8m 51s
align EMA	13m 30s
harpy extras	0s
impute	20m 6s
freebayes	23m 33s
sv leviathan	15m 16s
mpileup	3m 11s
sv naibr	25m 22s
phase	20m 32s
preflight	8m 20s
qc	12m 32s
simulate linkedreads	17m 25s
simulate variants	27m 49s
align strobe	9m 10s
	3h 58m 45s