Test Harpy Modules

Merge pull request #113 from pdimens/mergevariants #208

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Run time

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Job	Run time
Detect File Changes	6s
Build/Cache Container	9m 25s
demux gen1	0s
align BWA	0s
align EMA	0s
deconvolve	0s
harpy extras	0s
freebayes	0s
impute	18m 59s
sv leviathan	16m 20s
sv naibr	25m 50s
mpileup	0s
phase	0s
preflight	0s
qc	0s
simulate linkedreads	0s
simulate variants	0s
align strobe	0s
	1h 10m 40s