alpha-2

no changes, linked with Zenodo

Full Changelog: 0.1.0...alpha-2

v0.1.0

• replace muscle with mafft because MUSCLE memory requirements EXPLODE when >15l markers and constantly segfault
• pruning options to introduce thinning flexibiility

v0.0.1

This most alpha release possible in that it works start to finish on the data I'm using/testing it on, but refinements can yet be made.

To Do:

• fasta.gz support
• raw seq mapping?
• nicer plotting
• figure out bioconda recipe