Merge branch 'main' of github.com:elixir-europe/infectious-diseases-t…

…oolkit into pr/wna-se/194

.github/workflows/tool_list_conversion.yml

@@ -55,10 +55,6 @@ jobs:
         run: | 
           python var/tools_validator.py --reg --username ${{ secrets.FAIRSHARING_USERNAME }} --password "${{ secrets.FAIRSHARING_PASSWORD }}"
 
-      - name: Fetch country names with corresponding iso
-        run: |
-          python var/country_list.py
-
       - name: Show differences
         run: |
           git diff --stat
@@ -71,7 +67,7 @@ jobs:
           commit-message: Update tool/resource_list.yaml
           title: 'Automatic tool/resource-list update'
           body: |
-            This PR is automatically generated based on changes in the main_tool_and_resource_list.csv file or based on new links made between the tool table and TeSS.
+            This PR is automatically generated based on new links made between the tools and the registries: TeSS, Bio.tools and FAIRsharing.
 
             Please verify if these changes are valid.
           labels: |

CODE_OF_CONDUCT.md

@@ -52,7 +52,7 @@ As such, we do not tolerate behaviour that is disrespectful to our community mem
 We do not tolerate discrimination or harassment based on characteristics that include, but are not limited to: gender identity and expression, sexual orientation, disability, physical appearance, body size, citizenship, nationality, ethnic or social origin, pregnancy, familial status, veteran status, genetic information, religion or belief (or lack thereof), membership of a national minority, property, age, education, socio-economic status, technical choices, and experience level.
 
 Everyone who participates in the Infectious Diseases Toolkit activities is required to conform to this Code of Conduct.
-This Code of Conduct applies to all spaces managed by the Turing Way project including, but not limited to, in person focus groups and workshops, and communications online via GitHub.
+This Code of Conduct applies to all spaces managed by the Infectious Diseases Toolkit including, but not limited to, in person focus groups and workshops, and communications online via GitHub.
 By participating, contributors indicate their acceptance of the procedures by which the Infectious Diseases Toolkit project core development team resolves any Code of Conduct incidents, which may include storage and processing of their personal information.
 
 ### 2.1 Expected behaviour

_config.yml

@@ -50,41 +50,47 @@ defaults:
       type: "pages"
     values:
       type: pathogen_characterisation
+      datatable: true
 
   -
     scope:
       path: "socioeconomic-data"
       type: "pages"
     values:
       type: socioeconomic_data
+      datatable: true
 
   -
     scope:
       path: "human-clinical-and-health-data"
       type: "pages"
     values:
       type: human_clinical_and_health_data
+      datatable: true
 
   -
     scope:
       path: "human-biomolecular-data"
       type: "pages"
     values:
       type: human_biomolecular_data
+      datatable: true
 
   -
     scope:
       path: "showcase"
       type: "pages"
     values:
       type: showcase
+      datatable: true
 
   -
     scope:
       path: "national-resources"
       type: "pages"
     values:
       type: national_resources
+      datatable: true
 
   -
     scope: