cosmit

owkin · Oct 17, 2023 · b913d20 · b913d20
1 parent e2afb7d
commit b913d20
Showing 1 changed file with 2 additions and 1 deletion.
diff --git a/pydeseq2/ds.py b/pydeseq2/ds.py
@@ -219,6 +219,7 @@ def __init__(
 
         self.p_values: pd.Series
         self.statistics: pd.Series
+        self.SE: pd.Series
 
     def summary(
         self,
@@ -365,7 +366,7 @@ def run_wald_test(self) -> None:
 
         self.p_values = pd.Series(pvals, index=self.dds.var_names)
         self.statistics = pd.Series(stats, index=self.dds.var_names)
-        self.SE: pd.Series = pd.Series(se, index=self.dds.var_names)
+        self.SE = pd.Series(se, index=self.dds.var_names)
 
         # Account for possible all_zeroes due to outlier refitting in DESeqDataSet
         if self.dds.refit_cooks and self.dds.varm["replaced"].sum() > 0: