Repositories list

• 8dm50-machine-learning

  Public
  TU/e 8DM50 Machine Learning in Medical Imaging and Biology course materials.

  TeX

  •

  MIT License

  •97•35•1•0•Updated Oct 20, 2024Oct 20, 2024

• 8dc00-mia

  Public
  TU/e 8DC00 Medical Image Analysis course materials.

  Jupyter Notebook

  •107•24•0•2•Updated Oct 18, 2024Oct 18, 2024

• PUMA-challenge-baseline-track1

  Public
  Python

  •0•1•0•0•Updated Oct 4, 2024Oct 4, 2024

• PUMA-challenge-baseline-track2

  Public
  Python

  •0•1•0•0•Updated Oct 4, 2024Oct 4, 2024

• PUMA-challenge-eval-track2

  Public
  Python

  •0•0•0•0•Updated Oct 3, 2024Oct 3, 2024

• PUMA-challenge-eval-track1

  Public
  Python

  •0•0•0•0•Updated Oct 3, 2024Oct 3, 2024

• Melanoma-Dataset-Hovernet

  Public
  HoverNet inference code and weights for melanoma dataset. Code for metrics calculation.

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated May 29, 2024May 29, 2024

• Melanoma-Dataset-Mask-R-CNN

  Public
  Mask R-CNN inference code and weights for melanoma dataset. Code for metrics calculation.

  Python

  •

  Apache License 2.0

  •0•0•0•0•Updated May 28, 2024May 28, 2024

• 8DM20

  Public
  Python

  •1•2•0•0•Updated May 13, 2024May 13, 2024

• geojson_to_coco

  Public
  Python

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Mar 28, 2024Mar 28, 2024

• elastix-py

  Public
  A Python wrapper for the Elastix image registration software package.

  pythonimage-registrationelastix

  Python

  •5•12•1•0•Updated Mar 27, 2024Mar 27, 2024

• MAD-MIL

  Public
  Multi-head Attention-based Deep Multiple Instance Learning

  multiple-instance-learningwhole-slide-imageabmil+ 1mad-mil

  Python

  •

  GNU General Public License v3.0

  •0•3•0•0•Updated Mar 5, 2024Mar 5, 2024

• 8p361-project-imaging

  Public
  TU/e 8P361 Project Imaging course materials.

  Jupyter Notebook

  •

  MIT License

  •43•17•0•0•Updated Feb 4, 2024Feb 4, 2024

• DL-course-for-industry

  Public
  Two day introductory deep learning course for industry.

  Jupyter Notebook

  •

  MIT License

  •0•1•0•0•Updated Jan 24, 2024Jan 24, 2024

• server-tools

  Public
  Tools for working with GPU servers

  linuxgpunvidia

  Python

  •1•1•0•0•Updated Jul 11, 2023Jul 11, 2023

• Showcase_2023_04_06

  Public
  All files/presentations from the showcase session during the IMAG/e group meeting of April 6th 2023

  Python

  •0•0•0•0•Updated May 9, 2023May 9, 2023

• 8qa01

  Public
  Jupyter Notebook

  •9•4•0•0•Updated Jan 11, 2023Jan 11, 2023

• corneal_pachymetry

  Public
  Python

  •1•2•0•0•Updated Apr 7, 2022Apr 7, 2022

• tdlu-involution

  Public
  An automated method to measure TDLU involution

  Python

  •0•0•0•0•Updated Dec 14, 2021Dec 14, 2021

• surface_registration

  Public
  C++

  •2•1•0•0•Updated Jun 16, 2021Jun 16, 2021

• lung-nodule-msc-2018

  Public
  Python

  •3•9•2•0•Updated Nov 27, 2020Nov 27, 2020

• DCIS-grading

  Public
  Python

  •2•3•1•0•Updated Oct 4, 2020Oct 4, 2020

• transfer-medical-msc-2019

  Public
  Python

  •2•3•0•0•Updated Sep 13, 2020Sep 13, 2020

• essential-skills

  Public
  Educational module 'Essential Skills for Machine Learning'

  Python

  •37•36•0•0•Updated Sep 3, 2020Sep 3, 2020

• evaluation_MIL

  Public
  Python

  •3•1•0•0•Updated Jul 1, 2020Jul 1, 2020

• crowdskin-bsc-2020

  Public
  Python

  •0•1•0•0•Updated Jun 25, 2020Jun 25, 2020

• DeepBundle

  Public
  Python

  •1•5•0•0•Updated Jun 23, 2020Jun 23, 2020

• VesselTrackHFM

  Public
  Python

  •

  MIT License

  •0•2•0•0•Updated Mar 5, 2020Mar 5, 2020

• meta-segmentation-msc-2018

  Public
  Python

  •

  MIT License

  •1•3•5•0•Updated Dec 13, 2019Dec 13, 2019

• gryds

  Public
  A Python package for geometric transformations of images for data augmentation in deep learning

  pythondeeplearningconvolutional-neural-networks+ 2computervisionmedicalimageanalysis

  Jupyter Notebook

  •

  GNU General Public License v3.0

  •14•64•2•0•Updated Jul 31, 2019Jul 31, 2019