Repositories list

• AEOLUS-SmartAPI

  Public
  API to query FAERS Drug-Outcome stats

  Java

  •1•1•0•1•Updated Aug 26, 2024Aug 26, 2024

• covid19_twitter

  Public
  Covid-19 Twitter dataset for non-commercial research use and pre-processing scripts - under active development

  ngramstweetsdataset+ 5twitter-streamdisseminationfrequent-termsretweetstweets-acquired

  Jupyter Notebook

  •187•472•6•0•Updated Apr 17, 2023Apr 17, 2023

• DCGAN

  Public
  Python

  •1•3•0•1•Updated Dec 8, 2022Dec 8, 2022

• SMMT

  Public
  Social Media Mining Toolkit (SMMT) main repository

  tweetsannotationtwitter-api+ 5data-acquisitionspacydata-preprocessinggatheringdata-annotation

  Python

  •

  GNU General Public License v3.0

  •37•133•0•0•Updated Nov 11, 2022Nov 11, 2022

• mimic-omop

  Public
  Mapping the MIMIC-III database to the OMOP schema (using SQLite)

  PLpgSQL

  •0•3•1•0•Updated Jun 23, 2022Jun 23, 2022

• annotated_twitter_covid19_dataset

  Public
  A Biomedically Oriented automatically annotated Twitter COVID-19 Dataset

  spacymedacycovid-19+ 4covid19-datamedspascispacyannotated-datasets

  Python

  •2•7•0•0•Updated Mar 15, 2021Mar 15, 2021

• umls_loading_postgresql

  Public
  Loading Scripts for UMLS2018AA on PostgreSQL

  Shell

  •1•7•0•0•Updated Feb 16, 2021Feb 16, 2021

• OHDSIananke

  Public
  OHDSI Ananke - A Tool for Mapping Between OHDSI Concept Identifiers to Unified Medical Language System (UMLS) identifiers

  sqlpostgresqlmappings+ 2ohdsiumls

  R

  •

  Apache License 2.0

  •2•14•3•0•Updated Sep 28, 2020Sep 28, 2020

• open-covid-19-data

  Public
  Open source aggregation pipeline for public COVID-19 data, including hospitalization/ICU/ventilator numbers for many countries.

  Python

  •

  Apache License 2.0

  •67•0•0•0•Updated Sep 3, 2020Sep 3, 2020

• covid19_biohackathon

  Public
  Repository for our Covid19 Biohackathon Projects

  nlptwittertwitter-streaming-api+ 3nlp-dependency-parsingtwitter-sentiment-analysisspacy-nlp

  TeX

  •

  GNU General Public License v3.0

  •0•4•0•0•Updated Jun 3, 2020Jun 3, 2020

• DWForumAnalysis

  Public
  Work in progress

  Python

  •0•0•0•0•Updated Mar 13, 2020Mar 13, 2020

• InternetArchive-Pharmacovigilance-Tweets

  Public
  This repository contains the code of Mining archive.org’s Twitter stream grab for Pharmacovigilance research gold paper.

  deep-learningdatasetpharmacovigilance+ 2twitter-stream-grabmining-archive

  Python

  •2•10•0•0•Updated Jan 31, 2020Jan 31, 2020

• solar_project

  Public
  Python

  •0•1•0•0•Updated Dec 9, 2019Dec 9, 2019

• Ebola

  Public
  R

  •0•0•0•0•Updated Oct 7, 2019Oct 7, 2019

• Hurricane-Analysis

  Public
  R

  •0•1•0•0•Updated Aug 20, 2019Aug 20, 2019

• wind-sequence

  Public
  Python

  •0•0•0•0•Updated Aug 18, 2019Aug 18, 2019

• Twitter-Drug-Dataset

  Public
  Python

  •0•1•0•0•Updated Jun 17, 2019Jun 17, 2019

• FAIR_APHRODITE_phenotypes

  Public
  FAIR APHRODITE phenotype definitions

  0•0•0•0•Updated Jun 17, 2019Jun 17, 2019

• RDoC-Shared-sub-tasks-2019

  Public
  Python

  •0•0•0•0•Updated Jun 10, 2019Jun 10, 2019

• QueryHek_HelioviewerTool

  Public
  Python

  •0•0•0•0•Updated May 14, 2019May 14, 2019

• R-projects-Hurricane

  Public
  R

  •0•0•0•0•Updated May 14, 2019May 14, 2019

• w3id.org

  Public
  Website source code for w3id.org

  HTML

  •1.2k•0•0•0•Updated Apr 12, 2019Apr 12, 2019

• OHDSI2RDF

  Public
  OHDSI Vocabulary to RDF converter

  convertsconceptohdsi+ 1ohdsi-vocabulary

  Python

  •2•0•0•0•Updated Mar 9, 2019Mar 9, 2019

• Future-Frame-Prediction

  Public
  Python

  •0•1•0•0•Updated Mar 3, 2019Mar 3, 2019