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    10 repositories

    • circles2024

      Public
      R
      •
      MIT License
      •0•0•0•1•Updated Dec 19, 2024Dec 19, 2024

    • SpliceFlow

      Public
      R package to calculate splicing efficiencies from total RNA-seq data
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 9, 2024Dec 9, 2024

    • LATER

      Public
      Long-reads-based Alternative Termination Estimation and Recognition (LATER)
      rna-long-reads
      R
      •
      GNU General Public License v3.0
      •3•6•1•3•Updated Dec 9, 2024Dec 9, 2024

    • LASER

      Public
      Long-reads-based Alternative Splicing Estimation and Recognition
      R
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Jun 12, 2024Jun 12, 2024

    • hilgers-lab.github.io

      Public
      Hilgers Laboratory Documentation files
      HTML
      •0•0•0•0•Updated May 31, 2023May 31, 2023

    • CIAtranscriptome_assembly

      Public
      R
      •
      MIT License
      •2•1•0•1•Updated Mar 22, 2023Mar 22, 2023

    • ciaTaiLoR

      Public
      Long-read processing functions and CIATranscriptome feature extraction
      R
      •0•0•0•0•Updated Mar 22, 2023Mar 22, 2023

    • isoform-coevolution

      Public
      Python
      •
      MIT License
      •1•1•0•0•Updated Mar 22, 2023Mar 22, 2023

    • apa_target_caller

      Public
      APA target caller - derived from the exar2020 paper
      R
      •
      GNU General Public License v3.0
      •1•2•1•0•Updated Feb 21, 2022Feb 21, 2022

    • exar2020

      Public
      Carrasco et al. 2020 - Supporting workflows
      R
      •0•1•0•0•Updated Mar 16, 2021Mar 16, 2021