Repositories list

• ITK

  Public
  Fork to maintain topics specific to @KitwareMedical projects like Slicer Custom Application or Extension that will eventually be contributed back

  3d-slicer-fork

  Apache License 2.0

  •670•0•0•0•Updated Dec 11, 2024Dec 11, 2024

• otm-server

  Public
  hacktoberfest

  Python

  •

  Apache License 2.0

  •2•0•27•0•Updated Dec 9, 2024Dec 9, 2024

• mop

  Public archive
  R Package for Multiscale Optimal Transport

  C++

  •3•0•0•0•Updated Nov 26, 2024Nov 26, 2024

• vtk.js-examples

  Public archive
  These are a few examples for vtk.js

  JavaScript

  •22•28•6•0•Updated Nov 7, 2024Nov 7, 2024

• HierarchicalGeodesicModeling

  Public
  Python

  •0•1•0•0•Updated Nov 4, 2024Nov 4, 2024

• SlicerCustomAppTemplate

  Public
  Template to be used as a starting point for creating a custom 3D Slicer application

  pythonc-plus-pluscross-platform+ 9image-processingregistrationsegmentationvtkitkmedical-image-computing3d-slicer+ 2

  C++

  •

  Apache License 2.0

  •23•51•14•3•Updated Oct 25, 2024Oct 25, 2024

• paraview-glance-py

  Public
  An extended version of ParaView Glance that supports an integrated python server, e.g., for running ITK algorithms...

  JavaScript

  •

  BSD 3-Clause "New" or "Revised" License

  •5•6•9•3•Updated Oct 24, 2024Oct 24, 2024

• SlicerCBCTToothSegmentation

  Public
  Slicer extension for automated segmentation of individual teeth in cone-beam CT dental scans using a deep-learning based approach.

  segmentationdental3d-slicer-extension+ 1cbct-images

  Python

  •

  Apache License 2.0

  •5•10•1•0•Updated Oct 23, 2024Oct 23, 2024

• CourseInBiomedicalImageAnalysisAndVisualization

  Public
  Kitware Course in Biomedical Image Analysis and Visualization: ITK

  Jupyter Notebook

  •

  Apache License 2.0

  •8•15•0•1•Updated Oct 23, 2024Oct 23, 2024

• SlicerVirtualReality

  Public
  A Slicer extension that enables user to interact with a Slicer scene using virtual reality.

  cmakeopenvrvtk+ 33d-slicerkitware3d-slicer-extension

  C++

  •

  Apache License 2.0

  •58•119•18•4•Updated Sep 26, 2024Sep 26, 2024

• VolViewCustomAppTemplate

  Public
  VolView custom app template using file overrides to customize a webapp built using Vite

  volview-custom-application

  TypeScript

  •

  Apache License 2.0

  •2•1•1•0•Updated Sep 25, 2024Sep 25, 2024

• ITKHalideFilters

  Public
  Accelerating ITK Filters with Halide

  C++

  •

  Apache License 2.0

  •1•2•0•0•Updated Sep 18, 2024Sep 18, 2024

• ITKContourInterpolation

  Public
  An implementation of morphological contour interpolation

  segmentationinterpolation-methodsitk-module

  C++

  •

  Apache License 2.0

  •13•30•3•2•Updated Sep 18, 2024Sep 18, 2024

• dicom-anonymizer

  Public
  Tool to anonymize DICOM files according to the DICOM standard

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •47•108•7•0•Updated Sep 17, 2024Sep 17, 2024

• slicer-extensions-webapp

  Public
  Source code of the site allowing to browse and download Slicer extensions. This site is published at extensions.slicer.org and maintained by @Kitware on behalf of the 3D Slicer community.

  3d-slicer

  Vue

  •

  Apache License 2.0

  •2•2•13•10•Updated Sep 9, 2024Sep 9, 2024

• ITKUltrasound

  Public
  ITK module with classes particularly useful for ultrasound.

  pythonc-plus-plusitk+ 10ultrasoundarfiscan-conversionb-modeultrasound-tissue-characterizationstrain-imaginguspect+ 3

  C++

  •

  Apache License 2.0

  •22•52•13•7•Updated Sep 9, 2024Sep 9, 2024

• ITKStrain

  Public
  ITK filters to estimate a strain tensor field from a displacement field or a spatial transformation.

  itkstrain-imagingstrain-tensor+ 1itk-module

  C++

  •

  Apache License 2.0

  •11•10•2•0•Updated Sep 9, 2024Sep 9, 2024

• HASI

  Public
  High-throughput Applications for Skeletal Imaging

  Python

  •

  Apache License 2.0

  •8•6•8•6•Updated Sep 7, 2024Sep 7, 2024

• VTKExternalModule

  Public
  CMake buildsystem for externally building any built-in or remote VTK module outside of the VTK source tree.

  cmakevtk

  CMake

  •

  Apache License 2.0

  •4•5•0•1•Updated Aug 2, 2024Aug 2, 2024

• SlicerNNUnet

  Public
  3D Slicer nnUNet integration to streamline usage for nnUNet based AI extensions.

  machine-learningmedical-imaging3d-slicer-extension+ 1nnunet

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •1•14•5•0•Updated Jul 22, 2024Jul 22, 2024

• ITKIOScanco

  Public
  ITK Image IO for Scanco MicroCT .ISQ files

  imagingmicro-ctitk-module+ 1scanco

  C++

  •

  Apache License 2.0

  •13•13•2•5•Updated Jun 25, 2024Jun 25, 2024

• ITKRLEImage

  Public
  Run-length encoded memory compression scheme for an itk::Image

  run-length-encodingitkimaging+ 1itk-module

  C++

  •

  Apache License 2.0

  •8•4•0•0•Updated Jun 23, 2024Jun 23, 2024

• ITKPhaseSymmetry

  Public
  Multi-scale Steerable Phase-Symmetry Filters for ITK

  itkimagingphase-analysis+ 1itk-module

  C++

  •

  Apache License 2.0

  •13•2•0•0•Updated Jun 19, 2024Jun 19, 2024

• ITKMultipleImageIterator

  Public
  ITK remote module from an IJ article at http://www.insight-journal.org/browse/publication/915

  itk-module

  C++

  •

  Apache License 2.0

  •5•1•0•0•Updated Jun 19, 2024Jun 19, 2024

• Slicer

  Public
  Fork to maintain topics specific to @KitwareMedical projects like Slicer Custom Application that will eventually be contributed back

  3d-slicer-forkkitware-fork

  Other

  •458•1•0•0•Updated Jun 19, 2024Jun 19, 2024

• SlicerPythonTestRunner

  Public
  Python test runner extension for 3D Slicer based on PyTest and PyTest JSON Report

  3d-slicer-extension

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •1•3•4•0•Updated Jun 17, 2024Jun 17, 2024

• SlicerVirtualMouseCursor

  Public
  A Slicer extension that replaces the usual 2D mouse pointer with a 3D virtual cursor rendered in the scene.

  3d-slicer-extension

  Python

  •

  Apache License 2.0

  •1•0•0•0•Updated Jun 14, 2024Jun 14, 2024

• vpaw

  Public
  A surgical planning software system targeted to pediatric patients with airway obstruction.

  3d-slicer-custom-application

  Python

  •

  Other

  •5•3•14•0•Updated Jun 12, 2024Jun 12, 2024

• SlicerPipelines

  Public
  Pipelines are an extension for 3DSlicer that will offer the ability to create simple modules (aka pipelines) via a GUI interface with no coding knowledge needed.

  3d-slicer-extension

  Python

  •

  Apache License 2.0

  •7•5•2•0•Updated Apr 23, 2024Apr 23, 2024

• SlicerLookingGlass

  Public
  Extension for 3D slicer that enables user to visualize the 3D scene using the Looking Glass hardware display.

  3d-slicer-extension

  C++

  •

  Apache License 2.0

  •9•4•13•0•Updated Apr 23, 2024Apr 23, 2024