Repositories list

• GrEBI

  Public
  HPC knowledge graph aggregation pipeline

  Jupyter Notebook

  •

  Apache License 2.0

  •0•2•0•0•Updated Nov 27, 2024Nov 27, 2024

• gwas-sumstats-service

  Public
  Summary statistics service

  Python

  •0•2•11•11•Updated Nov 26, 2024Nov 26, 2024

• gwas-ui

  Public
  JavaScript

  •

  Apache License 2.0

  •4•5•22•4•Updated Nov 26, 2024Nov 26, 2024

• ols4

  Public
  Version 4 of the EMBL-EBI Ontology Lookup Service (OLS)

  bioinformaticslinked-datardf+ 7semantic-webowlknowledge-graphontologiesknowledge-managementknowledge-representationfair-data

  Java

  •

  Apache License 2.0

  •22•48•94•6•Updated Nov 26, 2024Nov 26, 2024

• efo

  Public
  Github repo for the Experimental Factor Ontology (EFO)

  Makefile

  •13•57•174•12•Updated Nov 26, 2024Nov 26, 2024

• gwas-data-commons

  Public
  This repo will be having common components used across multiple services

  Java

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Nov 25, 2024Nov 25, 2024

• gwas-rest-api

  Public
  Refactoring Code for Rest API

  Apache License 2.0

  •0•0•0•1•Updated Nov 25, 2024Nov 25, 2024

• oxo2

  Public
  An SSSOM compliant implementation of OxO that is backwards compatible with OxO version 1

  Java

  •

  Apache License 2.0

  •0•0•0•0•Updated Nov 25, 2024Nov 25, 2024

• gwas-data-services

  Public
  Java

  •

  Apache License 2.0

  •0•0•2•0•Updated Nov 22, 2024Nov 22, 2024

• gwas-blog

  Public
  https://ebispot.github.io/gwas-blog

  CSS

  •0•0•0•0•Updated Nov 22, 2024Nov 22, 2024

• eqtl-sumstats-service

  Public
  eQTL Summary Statistics Service

  Python

  •0•0•10•0•Updated Nov 21, 2024Nov 21, 2024

• gwas-utils

  Public
  Collection of tools and scripts to manage GWAS Catalog related infrastructure.

  quality-controltoolboxdata-release

  Python

  •3•6•4•6•Updated Nov 20, 2024Nov 20, 2024

• otar_profiler

  Public
  Pipeline for creating Open Targets profile and slim files from EFO.

  Ruby

  •0•4•0•0•Updated Nov 18, 2024Nov 18, 2024

• goci-rest

  Public
  Java

  •

  Apache License 2.0

  •1•4•25•2•Updated Nov 13, 2024Nov 13, 2024

• gwas-sumstats-harmoniser

  Public
  GWAS Summary Statistics Data Harmonisation

  Python

  •14•21•10•8•Updated Nov 7, 2024Nov 7, 2024

• gwas-sumstats-harmoniser-documentation

  Public
  gwas-sumstats-harmoniser-documentation

  TypeScript

  •0•0•0•0•Updated Nov 5, 2024Nov 5, 2024

• gwas-deposition-ui

  Public
  Deposition application for submitting GWAS data.

  JavaScript

  •1•2•5•8•Updated Oct 30, 2024Oct 30, 2024

• curategpt-docker

  Public
  Run CurateGPT using Docker

  Dockerfile

  •0•0•0•0•Updated Oct 24, 2024Oct 24, 2024

• gwas-curation-service

  Public
  Java

  •0•0•8•1•Updated Oct 23, 2024Oct 23, 2024

• gwasdepo-commons

  Public
  Java

  •0•0•1•0•Updated Oct 23, 2024Oct 23, 2024

• gwas-curation-utils

  Public
  Scripts to help enhance GWAS curation tasks.

  Python

  •0•0•0•1•Updated Oct 16, 2024Oct 16, 2024

• gwas-associationFilter

  Public
  Python

  •0•0•0•1•Updated Oct 16, 2024Oct 16, 2024

• goci

  Public
  GWAS Catalog Ontology and Curation Infrastructure

  Java

  •

  Apache License 2.0

  •19•26•268•9•Updated Oct 16, 2024Oct 16, 2024

• gwas-solr-slim

  Public
  Python

  •0•1•3•0•Updated Oct 10, 2024Oct 10, 2024

• gwas-curation-ui

  Public
  The New Curation Front End interface for the GWAS Catalog

  TypeScript

  •0•0•4•0•Updated Oct 9, 2024Oct 9, 2024

• gwas-sumstats-tools

  Public
  gwas-sumstats-tools

  Python

  •

  Apache License 2.0

  •2•9•4•0•Updated Oct 7, 2024Oct 7, 2024

• gwasdepo-master

  Public
  0•0•0•9•Updated Sep 26, 2024Sep 26, 2024

• scxa_2_cxg

  Public
  Python

  •

  Apache License 2.0

  •0•1•11•0•Updated Sep 3, 2024Sep 3, 2024

• SolrUtils

  Public
  Miscellaneous solr utils

  Java

  •0•0•0•0•Updated Aug 30, 2024Aug 30, 2024

• scxa_kg

  Public
  Python

  •0•0•0•0•Updated Aug 20, 2024Aug 20, 2024