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Generate a 3D plotly voxel graph from a 3D numpy array (created for MRI deep learning visualisations). Embed the plot into your github io!

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olive004/Plotly-voxel-renderer

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Visualising voxels with Plotly

How to use:

Render 3D numpy objects as voxels with plotly. Input: Numpy object file Outpu: Plotly html embedding Run plotly_voxels in your command-line with options specifying input numpy files.

$ git clone https://github.com/olive004/plotly_voxel_display.git
$ python3 generate_plotly_voxels -f My3DNumpyArray.npy

Examples

Find an example on our github.io medical image segmentation via deep learning! The graphs show the predicted 3D volume at different stages of learning.

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Generate a 3D plotly voxel graph from a 3D numpy array (created for MRI deep learning visualisations). Embed the plot into your github io!

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