Release version 1.1.1 #26
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Co-authored-by: James A. Fellows Yates <[email protected]>
Manual template merge 3.0.1
Important! Template update for nf-core/tools v3.0.2
> :nf-core: Friday, December 13th 11:01 PM > :alert: @channel the last tools release removed the includeConfig 'conf/modules.config' from the nextflow.config file. A patch release is on the way, meanwhile don't accept this change and don't remove this line! > thanks and sorry for the inconvenience 🙏:skin-tone-2:
Important! Template update for nf-core/tools v3.1.0
I did not commit the removal of the contributor information in ro-crate-metadata.json, which was probably caused by a bug in nf-core rocrate that does not recognise the 24.10.0 format of contributor attribution.
Prepare 1.1.1 release.
Add missing conda environment file.
Only this version is simultaneously available for Conda, Docker and Singularity. The local module only uses `jq -r` which is a simple command with same output in 1.5 and 1.6.
Use jq sequera containers
sateeshperi
approved these changes
Dec 18, 2024
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1.1.1release with template update (2.14.1 -> 3.1.0) and Nextflow minimal version update (23.04.0 -> 24.10.1). No changes to the nf-core modules or the workflows other than related to the template update. The local module was fixed to use a version ofjqthat is available for conda. Thanks to @sateeshperi for suggestions on Slack during the preparation of this PR.edit: I just remembered that this will fix issue #23.
PR checklist
nf-core lint).nextflow run . -profile test,docker --outdir <OUTDIR>).nextflow run . -profile debug,test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.CHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).