TMP: use filtered alignment to speed up tests

nextstrain · Aug 25, 2021 · 15426a2 · 15426a2
1 parent f7b1169
commit 15426a2
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/nextstrain_profiles/nextstrain-open/builds.yaml b/nextstrain_profiles/nextstrain-open/builds.yaml
@@ -20,10 +20,10 @@ S3_DST_ORIGINS: ["open"]
 inputs:
   - name: open
     metadata: "s3://nextstrain-data/files/ncov/open/metadata.tsv.gz"
-    sequences: "s3://nextstrain-data/files/ncov/open/sequences.fasta.xz"
+    # sequences: "s3://nextstrain-data/files/ncov/open/sequences.fasta.xz"
     # aligned: "s3://nextstrain-data/files/ncov/open/aligned.fasta.xz"
     # masked: "s3://nextstrain-data/files/ncov/open/masked.fasta.xz"
-    # filtered: "s3://nextstrain-data/files/ncov/open/filtered.fasta.xz"
+    filtered: "s3://nextstrain-data/files/ncov/open/filtered.fasta.xz"
 
 # Define locations for which builds should be created.
 # For each build we specify a subsampling scheme via an explicit key.