Merge pull request #474 from nextflow-io/add_params.outdir_to_hello-n…

…f-test_configs Add params.outdir to hello-nf-test configurations which are required with nextflow v24.10.0 and later
nextflow-io · Nov 20, 2024 · 5220a95 · 5220a95
2 parents edec19b + 102a842
commit 5220a95
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diff --git a/docs/hello_nextflow/08_hello_nf-test.md b/docs/hello_nextflow/08_hello_nf-test.md
@@ -1083,6 +1083,9 @@ params {
     // Primary input (file of input files, one per line)
     reads_bam        = "${projectDir}/data/sample_bams.txt"
 
+    // Output directory
+    params.outdir = "results_genomics"
+
     // Accessory files
     reference        = "${projectDir}/data/ref/ref.fasta"
     reference_index  = "${projectDir}/data/ref/ref.fasta.fai"

diff --git a/hello-nextflow/solutions/hello-nf-test/tests/nextflow.config b/hello-nextflow/solutions/hello-nf-test/tests/nextflow.config
@@ -12,6 +12,10 @@ params {
     // Primary input (file of input files, one per line)
     reads_bam        = "${projectDir}/data/sample_bams.txt"
 
+
+    // Output directory
+    params.outdir = "results_genomics"
+
     // Accessory files
     reference        = "${projectDir}/data/ref/ref.fasta"
     reference_index  = "${projectDir}/data/ref/ref.fasta.fai"