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Refactor kgof module #313

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wants to merge 94 commits into from
Closed

Refactor kgof module #313

wants to merge 94 commits into from

Commits on Nov 30, 2021

  1. Created kgof module

    @darsh-patel
    darsh-patel committed Nov 30, 2021
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  2. Added tutorial documentation

    @darsh-patel
    darsh-patel committed Nov 30, 2021
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  3. Resolved an import statement issue

    @darsh-patel
    darsh-patel committed Nov 30, 2021
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Commits on Dec 6, 2021

  1. first pass of removal of extraneous code

    @darsh-patel
    darsh-patel committed Dec 6, 2021
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  2. removed majority of extraneous functions in _utils.py

    @darsh-patel
    darsh-patel committed Dec 6, 2021
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Commits on Dec 7, 2021

  1. Further removal of redundancies + addition of citations

    @darsh-patel
    darsh-patel committed Dec 7, 2021
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  2. Removal of redundancies / unnecessary features

    @darsh-patel
    darsh-patel committed Dec 7, 2021
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  3. Removed NumpySeedContext to resolve redundancies with numpy.random de… 

    …fault_rng
    @darsh-patel
    darsh-patel committed Dec 7, 2021
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Commits on Dec 8, 2021

  1. Removed further dependencies on np.random and replaced with default_r… 

    …ng()
    @darsh-patel
    darsh-patel committed Dec 8, 2021
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  2. Removed subsample_ind

    @darsh-patel
    darsh-patel committed Dec 8, 2021
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  3. added testing file for kernel.py

    @darsh-patel
    darsh-patel committed Dec 8, 2021
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  4. black formatting applied

    @darsh-patel
    darsh-patel committed Dec 8, 2021
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Commits on Dec 9, 2021

  1. added testing file for density.py and replaces all instances of np.ra… 

    …ndom with default_rng() in data.py
    @darsh-patel
    darsh-patel committed Dec 9, 2021
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  2. Update index.rst

    @darsh-patel
    darsh-patel committed Dec 9, 2021
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  3. Updated circleci so tests run

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    darsh-patel committed Dec 9, 2021
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Commits on Dec 10, 2021

  1. Merge branch 'dev' into main

    @sampan501
    sampan501 authored Dec 10, 2021
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  2. Cleaned up docstrings and moved around functions (formatting)

    @darsh-patel
    darsh-patel committed Dec 10, 2021
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  3. Merge branch 'main' of https://github.com/darsh-patel/hyppo

    @darsh-patel
    darsh-patel committed Dec 10, 2021
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Commits on Dec 11, 2021

  1. Lots of cleanup and PR comments addressed

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  2. Rewrote necessary unit tests with pytest

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  3. Black reformatting

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  4. Removed extraneous imports

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  5. Dependencies installation attempt

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  6. Changed dependencies

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  7. removed extraneous imports

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  8. removed dependency on future

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  9. Fixed imports

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  10. Update fssd.py

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  11. fixed circular import issue

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  12. Black reformatting

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  13. Fixed import statements in unit test files

    @darsh-patel
    darsh-patel committed Dec 11, 2021
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  14. removed unittest

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    darsh-patel committed Dec 11, 2021
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Commits on Dec 12, 2021

  1. Modified import statements

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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  2. Made testing edits

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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  3. Testing edits

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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  4. Black reformatting

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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  5. Update test_fssd.py

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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  6. Testing edits

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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  7. Removed extraneous functions, rewrote tests

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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  8. Update test_density.py

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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  9. Removed extraneous functions from density.py

    @darsh-patel
    darsh-patel committed Dec 12, 2021
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Commits on Dec 13, 2021

  1. Merge branch 'dev' into main

    @sampan501
    sampan501 authored Dec 13, 2021
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  2. Removed extraneous functions and imports

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  3. Merge branch 'main' of https://github.com/darsh-patel/hyppo

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  4. Merge branch 'dev' into main

    @sampan501
    sampan501 authored Dec 13, 2021
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  5. Added test for density.Normal

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  6. Merge branch 'main' of https://github.com/darsh-patel/hyppo

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  7. Added tests for kernel.py

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  8. Fixed import error in test_kernel

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  9. Removed extraneous function from density.py

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  10. Removed extraneous GaussianMixture support

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  11. Added tests for data.py and removed extraneous function from data.py

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  12. Added tests for fssd.py

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  13. Added tests to test_kernel.py

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  14. Made changes to fssd syntax and added more tests for fssd

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  15. Added tests for fssd.py

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  16. black reformatting

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  17. Added more tests for data,py

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  18. density.py and data.py tests added

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  19. Removed extraneous code

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  20. Added more tests for fssd.py

    @darsh-patel
    darsh-patel committed Dec 13, 2021
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  21. Formatting fix

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    darsh-patel committed Dec 13, 2021
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Commits on Dec 17, 2021

  1. Merge branch 'dev' into main

    @sampan501
    sampan501 authored Dec 17, 2021
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Commits on Dec 19, 2021

  1. Changed description of base class.

    @darsh-patel
    darsh-patel committed Dec 19, 2021
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  2. Added kgof tutorial to index.rst, reformatted docstrings

    @darsh-patel
    darsh-patel committed Dec 19, 2021
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  3. Black reformatting in base.py

    @darsh-patel
    darsh-patel committed Dec 19, 2021
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  4. Fixed docstrings in fssd.py

    @darsh-patel
    darsh-patel committed Dec 19, 2021
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Commits on Dec 20, 2021

  1. Reformatted kgof tutorial

    @darsh-patel
    darsh-patel committed Dec 20, 2021
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  2. Merge branch 'dev' into main

    @sampan501
    sampan501 authored Dec 20, 2021
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  3. Fixed documentation and tutorial rendering issues

    @darsh-patel
    darsh-patel committed Dec 20, 2021
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  4. Merge branch 'main' of https://github.com/darsh-patel/hyppo

    @darsh-patel
    darsh-patel committed Dec 20, 2021
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  5. Fixed issues for misc functions not building

    @darsh-patel
    darsh-patel committed Dec 20, 2021
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  6. add current module back to misc and base class

    @sampan501
    sampan501 authored Dec 20, 2021
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  7. Merge branch 'dev' into main

    @sampan501
    sampan501 authored Dec 20, 2021
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  8. Tutorial formatting changes

    @darsh-patel
    darsh-patel committed Dec 20, 2021
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  9. Merge branch 'main' of https://github.com/darsh-patel/hyppo

    @darsh-patel
    darsh-patel committed Dec 20, 2021
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  10. [skip ci] fix nabla math symbol

    @sampan501
    sampan501 authored Dec 20, 2021
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Commits on Feb 16, 2022

  1. Removed helper functions from fssd class file

    @darsh-patel
    darsh-patel committed Feb 16, 2022
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  2. Merge branch 'main' of https://github.com/darsh-patel/hyppo

    @darsh-patel
    darsh-patel committed Feb 16, 2022
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  3. Made changes to test new modified fssd.py

    @darsh-patel
    darsh-patel committed Feb 16, 2022
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Commits on Feb 21, 2022

  1. Removed Data object inputs and replaced them with numpy array inputs

    @darsh-patel
    darsh-patel committed Feb 21, 2022
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  2. Removed Data dependent tests

    @darsh-patel
    darsh-patel committed Feb 21, 2022
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Commits on Feb 27, 2022

  1. Continued edits to testing files following Data removal

    @darsh-patel
    darsh-patel committed Feb 27, 2022
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Commits on Mar 17, 2022

  1. Removed redundant code, used compute_kern from tools

    @darsh-patel
    darsh-patel committed Mar 17, 2022
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  2. Updated kernel testing file to evaluate usage of tools functions

    @darsh-patel
    darsh-patel committed Mar 17, 2022
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Commits on Mar 30, 2022

  1. Added scipy.stats functionality to density sims

    @darsh-patel
    darsh-patel committed Mar 30, 2022
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Commits on Mar 31, 2022

  1. Update kernel.py

    @darsh-patel
    darsh-patel committed Mar 31, 2022
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Commits on Apr 4, 2022

  1. Removed extraneous references to Data

    @darsh-patel
    darsh-patel committed Apr 4, 2022
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Commits on Apr 13, 2022

  1. Black reformatting

    @darsh-patel
    darsh-patel committed Apr 13, 2022
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  2. Black reformatting

    @darsh-patel
    darsh-patel committed Apr 13, 2022
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  3. Made edits to the testing files to run more robust tests

    @darsh-patel
    darsh-patel committed Apr 13, 2022
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  4. black reformatting

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    darsh-patel committed Apr 13, 2022
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Commits on Apr 28, 2022

  1. Installed newest black build and reformatted files

    @darsh-patel
    darsh-patel committed Apr 28, 2022
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Commits on May 2, 2022

  1. Merge remote-tracking branch 'upstream/main'

    @darsh-patel
    darsh-patel committed May 2, 2022
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