v0.6.0

💥 Breaking Changes

• [MNT] Replaced Cognitive Atlas with SNOMED #397 (@rmanaem)

Authors: 1

• Arman Jahanpour (@rmanaem)

v0.5.0

🚀 Enhancements

• [ENH] Implement minimum cell size #388 (@surchs)

Authors: 1

• Sebastian Urchs (@surchs)

v0.4.3

🏠 Internal

• [REF] Manually verify ID token using PyJWT instead of google_auth #386 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.4.2

🚀 Enhancements

• [FIX] Filter for only ImagingSessions or PhenotypicSessions in SPARQL query #375 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.4.1

🐛 Bug Fixes

• [FIX] Ensure non-agg API doesn't error out when all matches lack pipeline data #369 (@alyssadai)

🧪 Tests

• [TST] Remove unneeded env file mount from test docker-compose.yml #366 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.4.0

💥 Breaking Changes

• [REF] Split generic /attributes endpoints into attribute-specific routers #358 (@alyssadai)
• [ENH] Implemented pipeline_version and pipeline_name query fields #345 (@rmanaem)

🚀 Enhancements

• [ENH] Add /pipelines router & route for fetching available pipeline versions #350 (@alyssadai)
• [REF] Update README links and simplify Docker Compose instructions #340 (@alyssadai)

🐛 Bug Fixes

• [FIX] Allow only "true" or None for is_control query parameter #364 (@alyssadai)
• [FIX] Fixed a typo in filtering pipeline name #351 (@rmanaem)
• [FIX] Ensure pipeline variables are returned from the graph in an aggregate query #349 (@alyssadai)

🏠 Internal

• [MNT] Updated default_neurobagel_query #347 (@rmanaem)
• [MNT] Removed build docker nightly workflow file #342 (@rmanaem)

📝 Documentation

• [MNT] Update default Neurobagel SPARQL query file and turn into PR checkbox #359 (@alyssadai)

🧪 Tests

• [TST] Add integration test against local test graph #357 (@rmanaem @surchs @alyssadai)

Authors: 3

• Alyssa Dai (@alyssadai)
• Arman Jahanpour (@rmanaem)
• Sebastian Urchs (@surchs)

v0.3.1

🐛 Bug Fixes

• [FIX] Ensure subjects without imaging sessions are considered in main query #333 (@alyssadai)

🏠 Internal

• [CI] Fix reference for DOCKERHUB_REPO in build_docker_on_release.yml #337 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.3.0

💥 Breaking Changes

• [FIX] Disable redirect slashes globally and remove trailing / from /query #328 (@alyssadai)
• [ENH] Add authentication to /query route #323 (@alyssadai)

🐛 Bug Fixes

• [FIX] Exclude sessions missing a queried property from matches #326 (@alyssadai)

Authors: 1

• Alyssa Dai (@alyssadai)

v0.2.1

🐛 Bug Fixes

• [FIX] Address performance issues in SPARQL query #308 (@surchs)
• [FIX] Disable timeout for request to graph #305 (@alyssadai)

Authors: 2

• Alyssa Dai (@alyssadai)
• Sebastian Urchs (@surchs)

v0.2.0

🎉 This release contains work from a new contributor! 🎉

Thank you, Abdul Samad Siddiqui (@samadpls), for all your work!

Release Notes

[MNT] Release new data model (#300)

We have updated the Neurobagel data model to allow users to specify phenotypic information at the session level (neurobagel/planning#83). This release updates the node API so it can understand the new graph data.

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💥 Breaking Changes

• [REF] Make session count names clearer in query response #282 (@alyssadai)
• [ENH] Support queries of session-level phenotypic attributes #264 (@alyssadai)

🚀 Enhancements

• [ENH] Added root endpoint with welcome message and API docs link #286 (@samadpls)
• [MNT] Release new data model #300 (@surchs)
• Delete .github/workflows/add_pr2project.yml #244 (@surchs)

📝 Documentation

• [DOC] Added warning about quoting in .env file for Docker commands #284 (@samadpls)
• [DOC] Add sample default SPARQL query to repo #277 (@alyssadai)

🧪 Tests

• [TST] Refactor tests #269 (@alyssadai)

🔩 Dependency Updates

• Bumped fastapi, starlette, and typing_extensions #295 (@rmanaem)

Authors: 4

• Abdul Samad Siddiqui (@samadpls)
• Alyssa Dai (@alyssadai)
• Arman Jahanpour (@rmanaem)
• Sebastian Urchs (@surchs)