Mutation Testing Experiment #46
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| name: Mutation Testing Experiment | |
| on: | |
| workflow_dispatch: | |
| inputs: | |
| packages: | |
| description: "JSON file that specifies packages to generate mutants for" | |
| default: "benchmarks.json" | |
| template: | |
| description: "Template to use for generating mutants" | |
| default: "template-full" | |
| systemPrompt: | |
| description: "System prompt to use when obtaining completions" | |
| default: "SystemPrompt-MutationTestingExpert" | |
| temperature: | |
| type: number | |
| description: "Sampling temperature to try when obtaining completions" | |
| default: 0.0 | |
| model: | |
| description: "Which LLM API to use" | |
| type: choice | |
| options: | |
| - "gpt-4o-mini" | |
| - "gpt-3.5-turbo" | |
| - "gpt-4-turbo" | |
| default: "gpt-4o-mini" | |
| # rateLimit: | |
| # description: "number of milliseconds between requests sent to the LLM" | |
| # type: number | |
| # default: 0 | |
| benchmarkMode: | |
| description: "use custom rate limiting for benchmarking" | |
| type: "boolean" | |
| default: false | |
| maxNrPrompts: | |
| type: number | |
| description: "maximum number of prompts to produce" | |
| default: 2000 | |
| maxTokensInCompletion: | |
| type: number | |
| description: "maximum number of tokens in a completion" | |
| default: 250 | |
| strykerOptions: | |
| description: "stryker options (e.g., --concurrency 1) to pass to stryker" | |
| default: "--concurrency 1" | |
| debug_enabled: | |
| type: boolean | |
| description: "Run the build with tmate debugging enabled (https://github.com/marketplace/actions/debugging-with-tmate)" | |
| default: false | |
| jobs: | |
| setup: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| packages: "${{ steps.parse_packages.outputs.packages }}" | |
| temperatures: "${{ github.event.inputs.temperature || '0.0' }}" | |
| maxNrPrompts: "${{ github.event.inputs.maxNrPrompts || '2000' }}" | |
| strykerOptions: "${{ github.event.inputs.strykerOptions }}" | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - uses: actions/setup-node@v3 | |
| with: | |
| node-version: 20 | |
| - id: parse_packages | |
| run: | | |
| packages=$(node \ | |
| .github/find_benchmarks.js " \ | |
| .github/${{ github.event.inputs.packages || 'benchmarks.json' }}") | |
| packages=$(echo $packages | tr '\n' ' ') | |
| echo "packages=$packages" >> $GITHUB_OUTPUT | |
| benchmark: | |
| needs: | |
| - setup | |
| runs-on: ubuntu-latest | |
| continue-on-error: true | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| package: ${{ fromJson(needs.setup.outputs.packages) }} | |
| steps: | |
| - name: checkout master branch of StrykerJS from https://github.com/neu-se/stryker-js into directory stryker-js | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: neu-se/stryker-js | |
| ref: master | |
| path: stryker-js | |
| - name: build StrykerJS | |
| run: | | |
| cd stryker-js | |
| npm install | |
| npm run build | |
| - name: print package info | |
| run: | | |
| echo "package.host=${{ matrix.package.host }}" | |
| echo "package.name=${{ matrix.package.name }}" | |
| echo "package.owner=${{ matrix.package.owner }}" | |
| echo "package.repo=${{ matrix.package.repo }}" | |
| echo "package.sha=${{ matrix.package.sha }}" | |
| echo "package.edits=${{ matrix.package.edits }}" | |
| echo "package.files=${{ matrix.package.files }}" | |
| echo "package.ignore=${{ matrix.package.ignore }}" | |
| # print the various options | |
| echo "temperature=${{ needs.setup.outputs.temperatures }}" | |
| echo "template=${{ github.event.inputs.template }}" | |
| echo "systemPrompt=${{ github.event.inputs.systemPrompt }}" | |
| echo "model=${{ github.event.inputs.model }}" | |
| echo "benchmarkMode=${{ github.event.inputs.benchmarkMode }}" | |
| echo "maxNrPrompts=${{ needs.setup.outputs.maxNrPrompts }}" | |
| echo "maxTokensInCompletion=${{ github.event.inputs.maxTokensInCompletion }}" | |
| echo "strykerOptions=${{ needs.setup.outputs.strykerOptions }}" | |
| - name: check out benchmark | |
| if: ${{ matrix.package.host == 'github.com' }} | |
| uses: actions/checkout@v3 | |
| with: | |
| repository: ${{ format('{0}/{1}', matrix.package.owner, matrix.package.repo) }} | |
| ref: ${{ matrix.package.sha }} | |
| path: ${{ matrix.package.name }} | |
| - name: Checkout gitlab package repo | |
| if: ${{ matrix.package.host == 'gitlab.com' }} | |
| run: | | |
| git clone ${{ format('https://gitlab.com/{0}/{1}', matrix.package.owner, matrix.package.repo) }} ${{ matrix.package.name }} | |
| cd ${{ matrix.package.name }} | |
| git checkout ${{ matrix.package.sha }} | |
| - name: Setup tmate session | |
| uses: mxschmitt/action-tmate@v3 | |
| if: ${{ github.event_name == 'workflow_dispatch' && inputs.debug_enabled }} | |
| - name: build project | |
| run: | | |
| cd ${{ matrix.package.name }} | |
| # if an edit command for editing package.json is specified (e.g., to disable linting), run it | |
| if [ -n "$MATRIX_PACKAGE_EDITS" ]; then | |
| ${{ matrix.package.edits }} | |
| fi | |
| npm install | |
| # if a build script exists, run it | |
| npm run build || echo "No build script found" | |
| env: | |
| MATRIX_PACKAGE_EDITS: ${{ matrix.package.edits }} | |
| - name: Check out llm-mutation-testing | |
| uses: actions/checkout@v3 | |
| with: | |
| path: llm-mutation-testing | |
| - name: Set up llm-mutation-testing | |
| run: | | |
| cd llm-mutation-testing | |
| npm run build | |
| - name: Generate mutants | |
| env: | |
| LLMORPHEUS_LLM_API_ENDPOINT: '${{ secrets.LLMORPHEUS_LLM_API_ENDPOINT }}' | |
| LLMORPHEUS_LLM_AUTH_HEADERS: '${{ secrets.LLMORPHEUS_LLM_AUTH_HEADERS }}' | |
| run: | | |
| cd ${{ matrix.package.name }} | |
| BENCHMARK_DIR=`pwd` | |
| cd ../llm-mutation-testing | |
| echo "Generating mutants for ${{ matrix.package.name }}" | |
| LLMORPHEUS_OPTIONS="--temperature ${{ needs.setup.outputs.temperatures }} --maxNrPrompts ${{ needs.setup.outputs.maxNrPrompts }} --systemPrompt ${{ github.event.inputs.systemPrompt }}.txt --model ${{ github.event.inputs.model }} --benchmark ${{ github.event.inputs.benchmarkMode }} --maxTokens ${{ github.event.inputs.maxTokensInCompletion }}" | |
| (time node --max-old-space-size=6144 benchmark/createMutants.js --path $BENCHMARK_DIR --mutate "${{ matrix.package.files }}" --ignore "${{ matrix.package.ignore }}" --template templates/${{ github.event.inputs.template }}.hb --caching false $LLMORPHEUS_OPTIONS) 2>&1 | tee -a ../${{ matrix.package.name }}/LLMorpheusOutput.txt | |
| - name: extract mutant-related info | |
| run: | | |
| cd ${{ matrix.package.name }} | |
| mkdir ${{ matrix.package.name }} | |
| mkdir ${{ matrix.package.name }}/${{ matrix.package.name }} | |
| cp -r MUTATION_TESTING/*/* ${{ matrix.package.name }}/${{ matrix.package.name }} | |
| cp LLMorpheusOutput.txt ${{ matrix.package.name }}/${{ matrix.package.name }}/LLMorpheusOutput.txt | |
| - name: Upload mutants info | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: mutants-${{ matrix.package.name }} | |
| path: ${{ matrix.package.name }}/${{ matrix.package.name }} | |
| - name: install stryker-js into benchmark and run stryker (precomputed mutators) | |
| run: | | |
| cd ${{ matrix.package.name }} | |
| npm install install-local # install-local is needed to install our custom version of stryker-js | |
| npx install-local ../stryker-js/packages/{core,util,api,instrumenter,*-runner} --legacy-peer-deps | |
| export MUTANTS_FILE=MUTATION_TESTING/${{ github.event.inputs.template }}_${{ github.event.inputs.model }}_${{ github.event.inputs.temperature }}/mutants.json | |
| STRYKER_FILES=$(node ../llm-mutation-testing/.github/expandGlob.js $(pwd) "${{ matrix.package.files }}" "${{ matrix.package.ignore }}") | |
| STRYKER_OPTIONS="${{ needs.setup.outputs.strykerOptions }}" | |
| (time npx stryker run $STRYKER_OPTIONS --usePrecomputed --mutate $STRYKER_FILES) 2>&1 | tee -a StrykerOutput.txt | |
| - name: extract summary from StrykerOutput.txt | |
| run: | | |
| cd ${{ matrix.package.name }} | |
| node ../llm-mutation-testing/.github/parseStrykerReport.js StrykerOutput.txt | |
| - name: gather reports/mutation/mutation.*, StrykerOutput.txt, and StrykerInfo.json into results.zip | |
| run: | | |
| cd ${{ matrix.package.name }} | |
| mkdir results | |
| mkdir results/results-${{ matrix.package.name }} | |
| cp reports/mutation/mutation.* results/results-${{ matrix.package.name }}/ | |
| cp StrykerOutput.txt results/results-${{ matrix.package.name }}/StrykerOutput.txt | |
| cp StrykerInfo.json results/results-${{ matrix.package.name }}/StrykerInfo.json | |
| - name: Upload artifacts | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: results-${{ matrix.package.name }} | |
| path: ${{ matrix.package.name }}/results | |
| combine_output: | |
| name: Combine output from all benchmarks | |
| needs: | |
| - setup | |
| - benchmark | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Download output zips | |
| uses: actions/download-artifact@v4 | |
| - name: Combine outputs | |
| run: | | |
| mkdir results | |
| mkdir results/results | |
| cd results/results | |
| # move all benchmark info into a single directory | |
| for benchmark in ../../results-* | |
| do | |
| # extract benchmark name | |
| name=$(echo $benchmark | sed 's/..\/..\/results-//') | |
| mv $benchmark/results-$name $name | |
| done | |
| cd ../.. | |
| - name: Upload combined output files | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: results | |
| path: results/results | |
| generate_report: | |
| name: Generate report | |
| needs: | |
| - setup | |
| - combine_output | |
| runs-on: ubuntu-latest | |
| steps: | |
| # download all files mutants-* | |
| - name: Download LLMorpheus results | |
| uses: actions/download-artifact@v4 | |
| with: | |
| pattern: "mutants-*" | |
| # download all files results-* | |
| - name: Download Stryker results | |
| uses: actions/download-artifact@v4 | |
| with: | |
| pattern: "results-*" | |
| # move all mutants-* directories into a single directory | |
| - name: Gather mutants into single directory | |
| run: | | |
| mkdir mutants | |
| cd mutants | |
| for mutants in ../mutants-* | |
| do | |
| # remove "../mutants-" prefix, leaving only the benchmark name | |
| name=$(echo $mutants | sed 's/\.\.\/mutants-//') | |
| echo "moving $mutants to $name" | |
| mv $mutants/* $name | |
| done | |
| cd .. | |
| # move all results-* directories into a single directory | |
| - name: Gather Stryker results into single directory | |
| run: | | |
| mkdir results | |
| cd results | |
| for results in ../results-* | |
| do | |
| # extract benchmark name | |
| name=$(echo $results | sed 's/\.\.\/results-//') | |
| echo "moving $results to $name" | |
| mv $results/* $name | |
| done | |
| cd .. | |
| - name: Check out llm-mutation-testing | |
| uses: actions/checkout@v3 | |
| with: | |
| path: llm-mutation-testing | |
| - name: Generate report | |
| run: | | |
| cd llm-mutation-testing | |
| npm run build | |
| # if stryker options are specified, include them in the title | |
| STRYKER_OPTIONS="${{ needs.setup.outputs.strykerOptions }}" | |
| if [ -n "$STRYKER_OPTIONS" ]; then | |
| title="Report (Precomputed mutators $STRYKER_OPTIONS)" | |
| else | |
| title="Report (Precomputed mutators)" | |
| fi | |
| node .github/generateReport.js "$title" ../results ../mutants > report.md | |
| more report.md > $GITHUB_STEP_SUMMARY | |
| - name: Upload report | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: report.md | |
| path: llm-mutation-testing/report.md | |
| - name: generate Latex table | |
| run: | | |
| cd llm-mutation-testing | |
| node .github/generateLatexTable.js "$title" ../results ../mutants > table.tex | |
| - name: Upload table | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: table.tex | |
| path: llm-mutation-testing/table.tex | |