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configuring environment for Intro to Nextflow workshop
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DininduSenanayake committed May 15, 2024
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Showing 1 changed file with 9 additions and 2 deletions.
11 changes: 9 additions & 2 deletions vars/ondemand-config.yml.example
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# number of training users
num_users_create: 2
# number of trainer users
num_trainers_create: 2
num_trainers_create: 3

# control plane flavour, usually set to
# - "balanced1.2cpu4ram" for testing
Expand All @@ -23,7 +23,7 @@ cluster_worker_count: 1
worker_flavour: balanced1.8cpu16ram
# worker disksize is the size of the drive on the worker node, whichh is used
# for pulling the docker images
worker_disksize: 60
worker_disksize: 40

# apps config
# - `k8s_container` should be the container that will be used by the app, usually
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enabled: false
pre_pull: false

nextflow:
k8s_container: ghcr.io/nesi/training-environment-jupyter-intronextflow-app:v0.1.0
repo: https://github.com/nesi/training-environment-jupyter-intronextflow-app.git
version: 'v0.1.0'
enabled: true
pre_pull: false

# this is currently required for containers app to run properly (fakeroot)
# Note: you should probably set to false unless you are running a containers workshop
enable_privileged_pods: false
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