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name: lint | ||
on: [push] | ||
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# https://stackoverflow.com/a/72408109 | ||
concurrency: | ||
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | ||
cancel-in-progress: true | ||
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||
jobs: | ||
lint: | ||
runs-on: ubuntu-latest | ||
name: lint | ||
steps: | ||
- uses: actions/checkout@v2 | ||
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||
- name: Create conda environment | ||
uses: mamba-org/provision-with-micromamba@main | ||
with: | ||
environment-file: environment.yml | ||
environment-name: deidentify | ||
cache-env: true | ||
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- name: Install dev dependencies | ||
shell: bash -l {0} | ||
run: | | ||
micromamba activate deidentify | ||
pip install -r requirements-dev.txt | ||
pip install -e . | ||
- name: Run lint | ||
shell: bash -l {0} | ||
run: | | ||
micromamba activate deidentify | ||
make lintci |
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name: test | ||
on: [push] | ||
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||
# https://stackoverflow.com/a/72408109 | ||
concurrency: | ||
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }} | ||
cancel-in-progress: true | ||
|
||
jobs: | ||
test: | ||
runs-on: ubuntu-latest | ||
name: test | ||
steps: | ||
- uses: actions/checkout@v2 | ||
|
||
- name: Create conda environment | ||
uses: mamba-org/provision-with-micromamba@main | ||
with: | ||
environment-file: environment.yml | ||
environment-name: deidentify | ||
cache-env: true | ||
|
||
- name: Install dev dependencies | ||
shell: bash -l {0} | ||
run: | | ||
micromamba activate deidentify | ||
pip install -r requirements-dev.txt | ||
pip install -e . | ||
- name: Run tests | ||
shell: bash -l {0} | ||
run: | | ||
micromamba activate deidentify | ||
make test | ||
integration: | ||
runs-on: ubuntu-latest | ||
strategy: | ||
matrix: | ||
python-version: ["3.7", "3.8", "3.9"] | ||
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||
steps: | ||
- uses: actions/checkout@v4 | ||
- name: Set up Python ${{ matrix.python-version }} | ||
uses: actions/setup-python@v4 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
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||
- name: Run demo | ||
shell: bash -l {0} | ||
run: | | ||
sudo apt-get install -y locales | ||
sudo locale-gen nl_NL.UTF-8 de_DE.UTF-8 | ||
pip install -e . --progress-bar off | ||
python -m spacy download nl_core_news_sm | ||
python demo.py |