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Add gh-actions ci
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jantrienes committed Nov 14, 2023
1 parent a827378 commit 258b905
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34 changes: 34 additions & 0 deletions .github/workflows/lint.yml
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name: lint
on: [push]

# https://stackoverflow.com/a/72408109
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true

jobs:
lint:
runs-on: ubuntu-latest
name: lint
steps:
- uses: actions/checkout@v2

- name: Create conda environment
uses: mamba-org/provision-with-micromamba@main
with:
environment-file: environment.yml
environment-name: deidentify
cache-env: true

- name: Install dev dependencies
shell: bash -l {0}
run: |
micromamba activate deidentify
pip install -r requirements-dev.txt
pip install -e .
- name: Run lint
shell: bash -l {0}
run: |
micromamba activate deidentify
make lintci
56 changes: 56 additions & 0 deletions .github/workflows/test.yml
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name: test
on: [push]

# https://stackoverflow.com/a/72408109
concurrency:
group: ${{ github.workflow }}-${{ github.event.pull_request.number || github.ref }}
cancel-in-progress: true

jobs:
test:
runs-on: ubuntu-latest
name: test
steps:
- uses: actions/checkout@v2

- name: Create conda environment
uses: mamba-org/provision-with-micromamba@main
with:
environment-file: environment.yml
environment-name: deidentify
cache-env: true

- name: Install dev dependencies
shell: bash -l {0}
run: |
micromamba activate deidentify
pip install -r requirements-dev.txt
pip install -e .
- name: Run tests
shell: bash -l {0}
run: |
micromamba activate deidentify
make test
integration:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.7", "3.8", "3.9"]

steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}

- name: Run demo
shell: bash -l {0}
run: |
sudo apt-get install -y locales
sudo locale-gen nl_NL.UTF-8 de_DE.UTF-8
pip install -e . --progress-bar off
python -m spacy download nl_core_news_sm
python demo.py

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