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Contact map plotting update
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mulqueenr committed Oct 2, 2023
1 parent 64a7818 commit fa0b61b
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2 changes: 1 addition & 1 deletion docs/MD anderson analysis/environment_setup.md
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Expand Up @@ -115,7 +115,7 @@ I'm sure there are a ton that I'm missing. But I'm getting started with these.

```R
install.packages(c("BiocManager","devtools"))
install.packages(c("Seurat","Signac","harmony")) #biocmanager install is necessary for signac
install.packages(c("Seurat","Signac","harmony","vcfR")) #biocmanager install is necessary for signac
BiocManager::install(c("cicero","ComplexHeatmap"))
devtools::install_github('cole-trapnell-lab/monocle3')
devtools::install_github("navinlabcode/copykit")
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