Merge pull request #6 from msa-em/dev

switching volume to k3d
msa-em · Jul 24, 2024 · 58a12e5 · 58a12e5 · github-actions · Jul 24, 2024
2 parents 0d14570 + 6f1a0b0
commit 58a12e5
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diff --git a/environment.yml b/environment.yml
@@ -6,18 +6,13 @@ dependencies:
   - numpy
   - scipy
   - matplotlib
-  - plotly
-  - pyvista
-  - nglview
+  - k3d # 3d volume rendering
   - h5py
   - imageio
   - av # instead of imageio-ffmpeg
   - ipywidgets
   - ipympl
   - jupyterlab
   - jupyterlab-myst
-  - trame
-  - trame-vtk
-  - trame-vuetify
   - 'nodejs>=20,<21'
   - mystmd
diff --git a/figures/volume_rendering.png b/figures/volume_rendering.png